Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00854 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCATCCCAATTCACCATCCTCTCCTTTCAGGAAACAAAAGAACAGCAACAAAAGGAGGCTTGGATCAAGAGCCTCTTCCTTTGAGTATTGGAGGAATGAGCCACTTCATAGGATCCCTGGCAGGATCTTCCTCAATGGCTCCAGCCAAGTTGCCTCCTTGTTCACCCAACAAGGAAAGAAGGGCACCAACCAAGATGCCATGATTGTTTGGGAGAACTTTTGTTCTAGACATGATACAATTTTCTGTGGAGTTTTTGATGGCCACGGTCCATTTGGTCACATGGTTGCAAAAAGAGTGAGGGATTCTCTCCCTCTAAAACTGAATGCCCATTGGGAACCTAATGTATCTGGTGAGGAAGTCCTCAAGGAGATTAGCGTTAACACCGCAGGAAGCATGAACTCAGAAGATGCTGCCTTTGTATCTGCTGATGAGGAATCCAGGGTTTCCGTTGATGCTGAGGAAACGGAGAAATCTGAAAAACACCCTGAAATCTTTCAGACACTTAAAGAGTCCTTTTTGAAGGCATTCAAAGTTATGGATAGAGAACTGAAGATGCACCAAACTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGATTAAGCAGGGTCGTGATCTTGTGATTGGAAATGTTGGTGACTCTAGAGCTGTGCTGGGTACCAGAGACAAAGATAATTCCCTTGTTGCAGTCCAGTTAACTGTGGATCTAAAACCCAATCTTCCTGCTGAAGAAGAAAGAATCCGCAAATGTAAAGGACGAGTCTTTGCTCTGCAGGATGAACCTGAAGTTGCTCGAGTCTGGTTACCAAATAATGACTCCCCTGGCCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTGAAAGATTTTGGTCTGATATCTGTTCCAGAGGTAACATACAGACGTCTCACTGAGAAGGATGAATTCGTTGTCTTGGCAACAGATGGGATTTGGGATGTGCTTTCAAACAAAGAAGTAGTAGACATTGTAGCAGCATCACCAAGGCGATCCTCAGCAGCTAGAGCATTAGTTGAGTCAGCAGTTAGAGCATGGAGATACAAATATCCAACTTCCAAAGTGGATGATTGTGCTGTGGTGTGCCTCTTTTTGGACTCAGACTTGAACAAAATATCTACTGCTTCTTCCCATGGAACCAAGTCCAAAGAGCAGCCTAGTTCAATGATCCAAGTAAGCAATGGTGATGGAGTGGAAGAAGATGTCTCTGGACCAACTGTTCTAGAAAGGTCAGGAACATGCAGGGAAGGAAATGGTGAAGGTAACACTTCACATGAAGAGGAAGAATTGAAGGAAGAAGAGGCAGAGATAGATGCTGATGAGTCAGAAAAAGAGTGGTCTGCACTTGAAGGGGTGTCTCGTGTGAACACATTGTTAAATCTTCCAAGATTTGTCCCTGACAAAGAAGACAAAGAAGCAGTAGCACAAGGGATGAGAAAACGCAAATGA 1506 0.4456 MGSCFSAESRSPHPNSPSSPFRKQKNSNKRRLGSRASSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMIVWENFCSRHDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNAHWEPNVSGEEVLKEISVNTAGSMNSEDAAFVSADEESRVSVDAEETEKSEKHPEIFQTLKESFLKAFKVMDRELKMHQTIDCFCSGTTAVTLIKQGRDLVIGNVGDSRAVLGTRDKDNSLVAVQLTVDLKPNLPAEEERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVTYRRLTEKDEFVVLATDGIWDVLSNKEVVDIVAASPRRSSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSDLNKISTASSHGTKSKEQPSSMIQVSNGDGVEEDVSGPTVLERSGTCREGNGEGNTSHEEEELKEEEAEIDADESEKEWSALEGVSRVNTLLNLPRFVPDKEDKEAVAQGMRKRK. 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00854 501 MobiDBLite consensus disorder prediction 394 464 - -
Seca2g00854 501 Coils Coil 442 464 - -
Seca2g00854 501 PANTHER PROTEIN PHOSPHATASE 31 382 IPR015655 GO:0004722|GO:0006470
Seca2g00854 501 Pfam Protein phosphatase 2C 159 362 IPR001932 -
Seca2g00854 501 SUPERFAMILY PP2C-like 55 385 IPR036457 -
Seca2g00854 501 MobiDBLite consensus disorder prediction 1 34 - -
Seca2g00854 501 ProSiteProfiles PPM-type phosphatase domain profile. 62 384 IPR001932 -
Seca2g00854 501 CDD PP2Cc 61 384 IPR001932 -
Seca2g00854 501 FunFam probable protein phosphatase 2C 33 57 387 - -
Seca2g00854 501 SMART PP2C_4 53 382 IPR001932 -
Seca2g00854 501 MobiDBLite consensus disorder prediction 1 23 - -
Seca2g00854 501 Gene3D - 57 386 IPR036457 -
Seca2g00854 501 MobiDBLite consensus disorder prediction 394 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00854 Seca-Chr2 13086713 13091178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00854 1 487 PP2C-type Phosphatase Gene Family AT3G02750 64.794 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00854 - - gmx:100790373 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00854 2 13086713 13091178 Seca2g00854 2 13086713 13091178 ECH