Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00823 ATGAGGACAGAATCTAATAGGAAGAGTGATGGTTACGAACCCGAAAAATCTAATTCACCTCCTAAACATAATGTTGATTCTGATGAGATTGGTGATGGTTATAAAAAGATATTTGAACTCACAGATGAGGATATCAGAGCTCTTGAGTTTGATTCTAAAGAAGATGGATTTGTTTTCTACCGTGAGTATGCAAAATTCATAGGGTTTGCTGTTAGGAAACATGATGTGTATAGAGATCGTAATGATGTAATCACAATGAGACAATTTGTATGTAACAAGGAGGGAGAAAGAAGTGTGAAGCACCTTAATAGGACTGATAGAAAGAGGGAGGCAAAGGCCATTACACGAACAAAATGTAATGCAAGGCTCCGAATTCATTTAGATTATAAGAGTAGAAAGTGGATTGTTGGTTGTTTTGAGCCAGCCCACAACCATGAATTGACTCCTGCTAGTATGGTTCATTTGATGCCAGCTTATCATGGGTTGAGTGTAGCTGATAAGGCATAG 507 0.3787 MRTESNRKSDGYEPEKSNSPPKHNVDSDEIGDGYKKIFELTDEDIRALEFDSKEDGFVFYREYAKFIGFAVRKHDVYRDRNDVITMRQFVCNKEGERSVKHLNRTDRKREAKAITRTKCNARLRIHLDYKSRKWIVGCFEPAHNHELTPASMVHLMPAYHGLSVADKA. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00823 168 Pfam FAR1 DNA-binding domain 59 149 IPR004330 -
Seca2g00823 168 MobiDBLite consensus disorder prediction 1 30 - -
Seca2g00823 168 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00823 Seca-Chr2 12452930 12453436 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g00823 FAR1 9.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00823 - - ccaj:109792835 166.392