LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca2g00819	ATGGATCATGTTGCTTCTTCTTACATGGATATGGAGGCTAATTTCATTTTAGACAACGGATTGGTAACATATTCTGACTTTCTTGATGTGCCACATTCTTCTCCTATTGAAGAACTTAATATTGAGCCCTATGTTGGAATGAAATTTGACTCATTGAAAAAAGTTGAATTTTATAAATTATTTGCGAAGACAAAAGGATTTGGGATTCGTACCCGCTCTAGCAAAAATAATTACTACATTTTTGTATGTGTTAGGGAAGGTGAACATATGGTGAAAAGTGGTAAAACAGAAAATAATCATGGTAGCATGGGAGAAGTTAAGAGAAAATGTTCAACCATTCACATGGGATGTCAAGCATCACTTATTGTGTCAAAGGATAAGAAGCGAGACATGTGGGTTATAAAATCTTTTGATAATAATCATAATCATGTCATTGCAAGTCCTAAGAGTGTATCTTATTTGAGGTGTCATAGAAAAATGTCTTGTGCTGCAAAAAACCTTGTTGAAAAGTTTAGTGAAGAAGGTTTACCTACTGAAAAGGTTGTTGCAATGTTTAATGGAAGCGGTTTAGCTTTTTCCAATAGAAATTGTTGGAATCATATGAGAAATGTTCGACGGATGAATTTGGATGTTGGAGATGCACAAGCAGTTTTTAATTATTGCAAACACAAACAAGCTCAAAATTCTGATTTTTTCTATTCAATATTACAATGTGATGATGATACTAGAATGGTAAATTTTTTTTTGGATGAATGCTAG	759	0.3294	MDHVASSYMDMEANFILDNGLVTYSDFLDVPHSSPIEELNIEPYVGMKFDSLKKVEFYKLFAKTKGFGIRTRSSKNNYYIFVCVREGEHMVKSGKTENNHGSMGEVKRKCSTIHMGCQASLIVSKDKKRDMWVIKSFDNNHNHVIASPKSVSYLRCHRKMSCAAKNLVEKFSEEGLPTEKVVAMFNGSGLAFSNRNCWNHMRNVRRMNLDVGDAQAVFNYCKHKQAQNSDFFYSILQCDDDTRMVNFFLDEC.	253

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca2g00819	252	PANTHER	OS01G0519700 PROTEIN	39	250	-	-
	Seca2g00819	252	Pfam	FAR1 DNA-binding domain	56	145	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca2g00819	Seca-Chr2	12442806	12443564	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca2g00819		FAR1	1.1e-11	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca2g00819	-		-	mtr:112420114	256.914