Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00791 ATGGATTCACTTTCCCTACTCCTCTCTTCTTATCCACTCTCCAAAACCCAGAAACTCTCTGCCTCCAAACCCTTCTCTCTTCTCTCAAACCAGAATCTACCTTCTCCTCAACCCCATTTTTCCTCCACCAAGAAAACCCCACTTTCTGCACTTCAAACCCATTCTCCTTACTCACTCCAGAACCTTCGCTTGCTTTTCCAACCCCAAAATCTCTTCACAAAATCATGTTTTTCATTTGCCATGATTGACCTCTTCACCCCATTTCCATGCCTTGCTGTTGAAGCCTCATCAGCGCCCAATTTGGTTGAGTCAGATGCTGGCAAAATCAACTTGGAAACAATCGTGGCTTCCATTGATGACTTTTTCAATCGATACCCTTTTTTCGTTGCTGGATGTACCTTCATTTGGCTGGTTGTGATCCCTCTGGTACAAGAGTATTTCAAGAAATGCAAATTTGTGTCAGCCATTGATGCCTTCAAGAAGCTCAGGGATGACCCTGATTCTCAGCTCTTGGACATAAGGGACAGGAAGAACTTGAAGTTTCTGGGGTCACCCAATTTGAAAATGTTGAAGAAGGAAGTGGTGCAGGTTGAGTTCACCGAGGGAAATGAAGATGGGTTTGTGAAGAAGGTGTTGGAAAGGTTCAAGGATGCGCCAAACACTGTTGTCTGTGTTTTGGACAGTTTCGAAGGTAATTCAATGAAAGTTGCTGAGTTACTATTTAACAATGGTTTCAAGGAGGCCTATGCAATCAAAGGTGGAGTCAGAGGTCAGCAAGGGTGGATGGCTATACAGGATACCCTTTTGCCTCCTCCTGTGCATATAAACCGAAGAAAAAAGACTAAAGCTTCACAAAATCTCAGTACAAATGGAAATGGAGCCATTCAGCAAAATGAAAGTAATGACGAGACTGCCTTATCCCCAGATATCCCTGCAGTTGGAAACCAAAAGACAGAAAATGGTCAGGTGAAAAGGTCTGCAGAGTCCAATCTGGAAATGAAAAATGGTTCAGTAGCTTCCTCTTCTCCCTATCCTAATTACCCAGATTTGAAGCCACCCTCATCTCCAACTCCATCAAAGCCAAAATAG 1089 0.4353 MDSLSLLLSSYPLSKTQKLSASKPFSLLSNQNLPSPQPHFSSTKKTPLSALQTHSPYSLQNLRLLFQPQNLFTKSCFSFAMIDLFTPFPCLAVEASSAPNLVESDAGKINLETIVASIDDFFNRYPFFVAGCTFIWLVVIPLVQEYFKKCKFVSAIDAFKKLRDDPDSQLLDIRDRKNLKFLGSPNLKMLKKEVVQVEFTEGNEDGFVKKVLERFKDAPNTVVCVLDSFEGNSMKVAELLFNNGFKEAYAIKGGVRGQQGWMAIQDTLLPPPVHINRRKKTKASQNLSTNGNGAIQQNESNDETALSPDIPAVGNQKTENGQVKRSAESNLEMKNGSVASSSPYPNYPDLKPPSSPTPSKPK. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00791 362 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 135 261 IPR036873 -
Seca2g00791 362 ProSiteProfiles Rhodanese domain profile. 164 270 IPR001763 -
Seca2g00791 362 MobiDBLite consensus disorder prediction 282 344 - -
Seca2g00791 362 CDD RHOD 159 257 - -
Seca2g00791 362 Gene3D - 148 271 IPR036873 -
Seca2g00791 362 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 19 272 IPR044240 -
Seca2g00791 362 MobiDBLite consensus disorder prediction 346 362 - -
Seca2g00791 362 MobiDBLite consensus disorder prediction 279 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00791 Seca-Chr2 12029160 12034234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00791 114 262 Sulfurtransferasese or Rhodanese AT4G01050 41.447 1.08e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00791 - - gmx:100808729 444.506