Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00781 ATGTTATCAGAGTTGATGAACTATTTGACAGCCTGCTTTAGGCCTAGTTTGGATCGATATGCACGCAGTGGTTCAGATGCTGGAGGTAAACAAGATGGACTCTTGTGGTACAAAGACTCAGGGAGGCACTTGAATGGTGAGTTTTCAATGGCTGTGGTCCAAGCCAACAACTTGCTGGAGGATCAGAGCCATATTGAATCAGGGAGTTTGAGCTCCAGTGATTCTGGGCCTTATGGTACCTTTATTGGTGTCTATGATGGGCATGGAGGACCTGAGACATCACGGTTTATCAATAATCACCTAGTTAACCATCTCAAGAGGTTTACTGCAGAGCAACAATCAATGTCTGTGGATGTAATTCGCAAGGCAATCCAAGCAACGGAAGAGGGATTTACGTCCGTTGTTGCCAAACAGTGGTCAATGAAACCACAAATTGCAGCTGTTGGATCATGCTGTCTTGTTGGTGTAATTTGTAACGGAACCCTTTATGTAGCAAATCTTGGTGATTCCCGGGCTGTTTTGGGAAGAGCAGTCAAGGCAACTGGGGAGGTTTTAGCTGTGCAATTGTCAACAGAGCATAATGCAGCAATAGAGTCTATAAGACAAGAGCTGCATTCTTTGCACCCTGATGATTCAAACATTGTTGTTTTGAAGCATAATGTATGGCGTGTGAAGGGCCTAATACAAGTTTCTAGATCTATTGGTGATGTATATCTGAAGAAGGCTGAATTCAATAGAGAACCACTATATGCAAAGTTTCGACTTCGTGAGCCAATCAAGAGGCCAATATTGAGTTCAGAACCATCGATATCAGTACACCAGTTGCAGCCACATGATCGGTTTATTATATTTGCATCTGATGGGCTTTGGGAGCACCTAAGCAATCAAGAAGCAGTTGATATAGTTCAAAATAATCCCCACTCTGGAATTGCAAGGAGGCTTGTAAAAACTGCACTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACTTAAAAAAAATTGACCGTGGGGTCCGTCGGCATTTCCATGATGATATCACAGTAATTGTTGTGTTTATAGACTCAAATCTTGTGAGTAGGGCAAGCACTGTGAAATTCCCTAGTATATCTGTTCGAGGGGGTGGTATCAATCTTCCTCCTAACACACTGGCACCTTGTACTACACCAACAGAGGCTGGTGCTACCTGA 1194 0.4305 MLSELMNYLTACFRPSLDRYARSGSDAGGKQDGLLWYKDSGRHLNGEFSMAVVQANNLLEDQSHIESGSLSSSDSGPYGTFIGVYDGHGGPETSRFINNHLVNHLKRFTAEQQSMSVDVIRKAIQATEEGFTSVVAKQWSMKPQIAAVGSCCLVGVICNGTLYVANLGDSRAVLGRAVKATGEVLAVQLSTEHNAAIESIRQELHSLHPDDSNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPIKRPILSSEPSISVHQLQPHDRFIIFASDGLWEHLSNQEAVDIVQNNPHSGIARRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFIDSNLVSRASTVKFPSISVRGGGINLPPNTLAPCTTPTEAGAT. 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00781 397 CDD PP2Cc 48 355 IPR001932 -
Seca2g00781 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Seca2g00781 397 Pfam Protein phosphatase 2C 63 324 IPR001932 -
Seca2g00781 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Seca2g00781 397 Gene3D - 37 365 IPR036457 -
Seca2g00781 397 SMART PP2C_4 39 353 IPR001932 -
Seca2g00781 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Seca2g00781 397 PANTHER PROTEIN PHOSPHATASE 38 353 IPR015655 GO:0004722|GO:0006470
Seca2g00781 397 FunFam Phosphatase 2C family protein 36 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00781 Seca-Chr2 11840543 11844850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00781 1 396 PP2C-type Phosphatase Gene Family AT4G38520 75.000 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00781 - K01102 jre:109006616 692.96