Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00750 ATGCTCCTCCATTTGCTGCATCTCCCAACTCCACCATCTCACTCTCACTCTTCAAACCTTATCCCAAACACAACCGGTTACATCAAGTTCCGAACAACCTACCGTGAAAACCTCCGTTACCTTAAAACCTTAACCATAATCGACCCAAAAACCAAACCCAACAACCTCCCTCTCCCCGACGCCGTCGACCACATCCTCATAACCCTCGACTTCCTCAAATCCCATTCCTTCTCCGACGCCGACATCCCCCGCCTGGCCCAACACTGTCCCCACCTCTTCTCCACCTCTGTCGACCCCACCGACATCGCCCCTGTCTTCAACTTCCTCTCCGGCGACCTCCGCGCCACCGCCGACGAGTCCCGCGGCCTCATCCTCCGCTGCCCCAAACTCCTCTTCTCCGACGCTGACCTCTGCCTCCGTCCCACGCTCCAATTCCTCCGGCGCGTCGGGGTTCGCGACCTGAACCGGCCAACGAACCGGAACGCGCACCTGCTGAACACGCGCGTGGAGAAGCTGCGCGTGAGGGTGAGGTTCCTTCAGGATGTTGGTTTCTCGTACGAGGAGGCGATGAACGCTTGTGCGAGGTTGCCGGCGATTTTTGGGTACGATGTGGAGAACAATTTGTGGCCGAAATTCTCTTATCTGGTGAAGGAGATGGAGAGGGAGTTGGAGGAGTTGAAGAAGTTTCCTCAATACTTTGGGTTCAGTTTGGAGAAGAGGATTGTGCCAAGGCATTTGCATTTGAAAGAAAGGGGTGTTAGGATTCCCTTGAACAGAATGTTGCTGTGGGGTGATGACAAGTTCTATGCTAAGTGGAAGTGA 822 0.5487 MLLHLLHLPTPPSHSHSSNLIPNTTGYIKFRTTYRENLRYLKTLTIIDPKTKPNNLPLPDAVDHILITLDFLKSHSFSDADIPRLAQHCPHLFSTSVDPTDIAPVFNFLSGDLRATADESRGLILRCPKLLFSDADLCLRPTLQFLRRVGVRDLNRPTNRNAHLLNTRVEKLRVRVRFLQDVGFSYEEAMNACARLPAIFGYDVENNLWPKFSYLVKEMERELEELKKFPQYFGFSLEKRIVPRHLHLKERGVRIPLNRMLLWGDDKFYAKWK. 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00750 273 SMART mt_12 121 152 IPR003690 GO:0003690|GO:0006355
Seca2g00750 273 SMART mt_12 155 185 IPR003690 GO:0003690|GO:0006355
Seca2g00750 273 SMART mt_12 190 222 IPR003690 GO:0003690|GO:0006355
Seca2g00750 273 SMART mt_12 83 116 IPR003690 GO:0003690|GO:0006355
Seca2g00750 273 SMART mt_12 223 254 IPR003690 GO:0003690|GO:0006355
Seca2g00750 273 FunFam Transcription termination factor MTEF1, chloroplastic 32 273 - -
Seca2g00750 273 Pfam mTERF 121 268 IPR003690 GO:0003690|GO:0006355
Seca2g00750 273 PANTHER CGI-12 PROTEIN-RELATED 170 271 IPR003690 GO:0003690|GO:0006355
Seca2g00750 273 Gene3D Transcription termination factor 3, mitochondrial 49 273 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00750 Seca-Chr2 11584688 11585509 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca2g00750 mTERF 2.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00750 K15032 - gmx:100812333 409.838