Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00749 ATGGAAGGAGAGAGAGGTGTTCCCAATTATGAGCTTCAAGTTTCATTCTCCTCACAACCCATAATCCACCAAATGGGTTTTGCTCAATTTGAAGAAAATAATCAAGTCCTTGGCCTCTTGTCACCTTCTTCACAATCTCAATCTTCTCAGCTCTCTCAATCCTTAAACAGTGGCGCCGCCGCCAGCACCACCGCCGCCACAACCATCGGATTCAGTCATAACGAACTGGTCCCCAGAACATGGAATAACGACCAGGTTGTTTACTTTTCTATTACAAAATTAAAAGTGGGAACTCTGGATCCTAAGGCTGTTAATGATGAAAATTGCACTGGAAACGCTAGTGATGGCAATAACAATTCATGGAGGAGTGCAGCTGCAGATAAGAGCAAGGTGAAAATAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTCGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGGTAA 525 0.4286 MEGERGVPNYELQVSFSSQPIIHQMGFAQFEENNQVLGLLSPSSQSQSSQLSQSLNSGAAASTTAATTIGFSHNELVPRTWNNDQVVYFSITKLKVGTLDPKAVNDENCTGNASDGNNNSWRSAAADKSKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00749 174 Gene3D WRKY domain 140 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g00749 174 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 174 IPR044810 GO:0003700
Seca2g00749 174 ProSiteProfiles WRKY domain profile. 148 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g00749 174 SUPERFAMILY WRKY DNA-binding domain 145 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g00749 174 Pfam WRKY DNA -binding domain 154 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00749 Seca-Chr2 11565098 11566427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00749 3 174 WRKY Transcription Factor Family AT2G44745 51.381 4.34e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca2g00749 WRKY 1.8e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00749 - - cave:132166977 216.853