Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00745 ATGTTCATGGTGATTCTAGCATACTGGCGGATTTTGTTCATATTTCTTTGTGTCATTCTAACACCTCAAGCTGCAGCTGAAGATAGTGAAGCAAATGCTCTGTTAAAGTGGAAAAACAGCTTTGAAAATCAAAGCCAAGCTGTATTGTCAACTTGGAAAGGTACTAATCCATGCAAATGGAAAGGAATTCAGTGTGACAAATCCAACTCTGTCTCTACAATAAATCTTGCAAATTATGGACTAAAAGGTACACTCCACACTCTCAGCTTCTCCTCATTCCCCAACCTCCTTATCCTAAATATCTTAAACAACTTCTTTCATGGGACCATTCCCCCACAAATTGGTAACTTGTCAAAAGTAAATGTTTTGAACTTTTCTTCAAATCCTCTTGATGGTTCCATCCCTCAAGAAATGTGGACATTAAGGACTTTGCATAGCCTTGATCTTTCCTTATGTAAACTGAGTGGAGAAATTCCTAATTCTATAGCAAACTTGTCCAACCTATCATTTCTAGATTTAGGTACCAACAAATTTTCTGGCTACATTCCTCCAGGGATAGGAAAATTGAACAAATTGGAGTATCTAGCTATTGCAGAAAATAACTTTTTTGGTACCATTCCTCAAGAAATTGGAATGTTGACAAAGCTTAGGCTTATGGATTTGTCACTGAACTCTCTCTCTGGTACTATCCCAAGAACAATAGGTAACATGAGCAATTTAAATAGGCTTGTCATTTCTAATAACACCCTTTTGTCTGGACCAATCCCATCTTCCTTATGGAACATGTCTAACTTGTCCTGGCTCCAGCTTTATGGCAATAGTCTTTCTGGATCAATACCATCTTCCATAGGAAACTTAGTCAATTTGAATATCCTTATACTTGAATCCAACCACTTTTCTGGACCCATTCCTTCCACTATTGGAAACTTGACAAAGCTCACTGAATTATACTTGGGTTTTAATAATTTTTCTGGATCAATTCCTGCCTCTATAGGAAATTTGATCAATCTGGACGTCCTCAGTCTCCAAGGAAACAATCTCTCTGGATCTATTCCTACCACAATTGGAAATTTGAAAAGGCTCACTGTCTTGGAACTATCCACCAACAAACTTAGTGGTAGCATTCCAAAGGTCTTGAATAACATTACAAACTGGTTATCCTTGTTATTATCTAAGAATGATTTTATTGGCCATTTGCCATCTCAAATCTGCTCTGGTGGGTCACTAGTGTACTTCAATGCTTATGAAAACCATTTAACAGGTCCAATACCAACAAGCTTGAAGAACTGTTCTAGTATTGTTAGACTTAGGCTTGAGGGCAACCAATTGGAAGGAGATATAGCACAAGATTTTGGTGTATATCCAAATTTGGAATACATTGATCTTAGTGACAATAAATTTCATGGTCACATTTCACCAAATTGGGGGAAGTGCCCTAAACTTAATAGCTTGATGATATCCAACAATAATATTTCTGGTGGTATACCAGTAGAGCTTGTTGAGGCAACCAAGCTAGGTAGGCTTCATCTTTCTTCAAACCACTTGACTGGGAAGGTTCCAAAGCAATTAGGAAACTTGAAATCATTAGTTGAACTCAAGACTAACAACAATAAATTTTCAGGATACATTCCCACAGAAATTGGACTGCTGCAAAAACTTGAAATTTTGGATCTAGGAGGAAATGAGTTGAGTGGCACAATACCAAAAGAAGTCATGATGTTACCCAAGTTAAGGAACTTGAATTTGAGCATAAACAAACTTGAGGGAAGCATTCCCTCTCAGTTTGGACTGTCTCTGGAATCTCTTGATCTTAGTGGCAATTTTTTGAATGGAAAAATACCAACAAGTCTTGGAAGTTTGAAACACTTGTCAATGTTTAATCTCTCACATAATGGTCTTTCTGGCACCATTCCTCCTACTTTTAGTGGGACATTGGATTTTGTTAACATATCAGATAACAGGTTAGAAGGGCCACTTCCAAACAGTCCAGCTTTTCTTCATGCTCCTTTTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATGTCACAGGATTGACTCCTTGCCCAACTAACAATAGTAAAAAAAGCAACAAAGTCATCTTGTGGGTACTCCTTGCCTTGGGAAGTATAATACTAGTTTTGTTTGGGGTGGGACTTTCAATGTATATATTTTGTGGAAGAAAACAAAAGAAAGAAAGCCAATCTAAGGATGCAAAAGGAGGAGCACTCTTTTCCATATGGAGTTATGATGGGAAAATAATGTTTGAAAATATCATTGAAGCTACAGAGAATTTTGATGACAAATATCTCATTGGAGTAGGAAGTCAAGGAAATGTTTACAAGGCAGAGTTGGCTGCAGGTTTGGTTGTTGCTGTGAAGAAACTTCATTCAGTAACAGATGAGGAAATGTCAAATTTCAGTTCAAGGTCTTTTATAAGTGAGATTCAAACCTTGACAGAAATCAAACACAGGAACATTATAAAGCTTCATGGATTTTGCTTACATTCAAGGTTCTCATTTTTGGTTTATAAGTTCTTGGAAGGAGGTAGCTTGGACCAAATACTAAACAATGACACACAAGCATTTGCATTTGATTGGGAAAAGAGAGTGAATGTTGTCAAAGGTGTGGCTAATGCTTTGTCCTATTTGCATCATGATTGCTCACCTCCTATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTTTAGATCTTGAATATGAAGCTCATGTCTCTGACTTTGGGACAGCTAAGTTTCTGAAGCCTGGTTCACATAGTTGGACCCCATTTGCAGGAACCTTTGGGTATGCAGCTCCAGAGTTAGCTCATACTATGCAAGTGAATGAGAAATGTGATGTTTACAGCTTTGGAGTACTTGCTTTGGAAATCATTATGGGAAAACATCCTGGGGATCTCATTTCTTTATTCATGTCACCATCTACAGTGCTAGTGGCTGATGATTTGCTATTGAGTGATGTTTTGGATCAAAGACTTCCTCAACCAATAAAACCAATTGATGAGAATGTGATCTTGATTACATGGTTGGCACTTGCTTGTTTGAGTAAAAATCCACGTTCTCGCCCACCCATGGATCAAGTATCTAAGGCACTTGTAACAGGAAAATCACCTGTGAGAGACCAAATTCCCATGATCAAACTAGGCCAACTCCATTGA 3177 0.3771 MFMVILAYWRILFIFLCVILTPQAAAEDSEANALLKWKNSFENQSQAVLSTWKGTNPCKWKGIQCDKSNSVSTINLANYGLKGTLHTLSFSSFPNLLILNILNNFFHGTIPPQIGNLSKVNVLNFSSNPLDGSIPQEMWTLRTLHSLDLSLCKLSGEIPNSIANLSNLSFLDLGTNKFSGYIPPGIGKLNKLEYLAIAENNFFGTIPQEIGMLTKLRLMDLSLNSLSGTIPRTIGNMSNLNRLVISNNTLLSGPIPSSLWNMSNLSWLQLYGNSLSGSIPSSIGNLVNLNILILESNHFSGPIPSTIGNLTKLTELYLGFNNFSGSIPASIGNLINLDVLSLQGNNLSGSIPTTIGNLKRLTVLELSTNKLSGSIPKVLNNITNWLSLLLSKNDFIGHLPSQICSGGSLVYFNAYENHLTGPIPTSLKNCSSIVRLRLEGNQLEGDIAQDFGVYPNLEYIDLSDNKFHGHISPNWGKCPKLNSLMISNNNISGGIPVELVEATKLGRLHLSSNHLTGKVPKQLGNLKSLVELKTNNNKFSGYIPTEIGLLQKLEILDLGGNELSGTIPKEVMMLPKLRNLNLSINKLEGSIPSQFGLSLESLDLSGNFLNGKIPTSLGSLKHLSMFNLSHNGLSGTIPPTFSGTLDFVNISDNRLEGPLPNSPAFLHAPFESLKNNKGLCGNVTGLTPCPTNNSKKSNKVILWVLLALGSIILVLFGVGLSMYIFCGRKQKKESQSKDAKGGALFSIWSYDGKIMFENIIEATENFDDKYLIGVGSQGNVYKAELAAGLVVAVKKLHSVTDEEMSNFSSRSFISEIQTLTEIKHRNIIKLHGFCLHSRFSFLVYKFLEGGSLDQILNNDTQAFAFDWEKRVNVVKGVANALSYLHHDCSPPIVHRDISSKNVLLDLEYEAHVSDFGTAKFLKPGSHSWTPFAGTFGYAAPELAHTMQVNEKCDVYSFGVLALEIIMGKHPGDLISLFMSPSTVLVADDLLLSDVLDQRLPQPIKPIDENVILITWLALACLSKNPRSRPPMDQVSKALVTGKSPVRDQIPMIKLGQLH. 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00745 1058 Gene3D Ribonuclease Inhibitor 380 470 IPR032675 -
Seca2g00745 1058 Gene3D Ribonuclease Inhibitor 182 279 IPR032675 -
Seca2g00745 1058 ProSitePatterns Tyrosine protein kinases specific active-site signature. 892 904 IPR008266 GO:0004672|GO:0006468
Seca2g00745 1058 ProSiteProfiles Protein kinase domain profile. 766 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00745 1058 FunFam MDIS1-interacting receptor like kinase 2 isoform A 27 182 - -
Seca2g00745 1058 Gene3D Transferase(Phosphotransferase) domain 1 847 1048 - -
Seca2g00745 1058 SUPERFAMILY RNI-like 74 381 - -
Seca2g00745 1058 Pfam Leucine Rich Repeat 598 620 IPR001611 GO:0005515
Seca2g00745 1058 Pfam Protein kinase domain 768 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00745 1058 FunFam Leucine-rich receptor-like protein kinase family protein 279 377 - -
Seca2g00745 1058 FunFam Leucine-rich repeat receptor protein kinase MSP1 729 846 - -
Seca2g00745 1058 Gene3D Ribonuclease Inhibitor 569 690 IPR032675 -
Seca2g00745 1058 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Seca2g00745 1058 Gene3D Ribonuclease Inhibitor 471 568 IPR032675 -
Seca2g00745 1058 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Seca2g00745 1058 SUPERFAMILY Protein kinase-like (PK-like) 751 1038 IPR011009 -
Seca2g00745 1058 Gene3D Ribonuclease Inhibitor 280 379 IPR032675 -
Seca2g00745 1058 SMART LRR_sd22_2 550 582 - -
Seca2g00745 1058 SMART LRR_sd22_2 358 384 - -
Seca2g00745 1058 SMART LRR_sd22_2 310 336 - -
Seca2g00745 1058 PANTHER LEUCINE RICH REPEAT KINASE 2 331 1042 - -
Seca2g00745 1058 Gene3D Phosphorylase Kinase; domain 1 726 846 - -
Seca2g00745 1058 SMART LRR_typ_2 165 189 IPR003591 -
Seca2g00745 1058 SMART LRR_typ_2 117 141 IPR003591 -
Seca2g00745 1058 SMART LRR_typ_2 262 286 IPR003591 -
Seca2g00745 1058 SMART LRR_typ_2 310 334 IPR003591 -
Seca2g00745 1058 SMART LRR_typ_2 550 573 IPR003591 -
Seca2g00745 1058 SMART LRR_typ_2 574 597 IPR003591 -
Seca2g00745 1058 SMART LRR_typ_2 358 381 IPR003591 -
Seca2g00745 1058 SMART LRR_typ_2 620 643 IPR003591 -
Seca2g00745 1058 SMART LRR_typ_2 213 237 IPR003591 -
Seca2g00745 1058 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 382 693 - -
Seca2g00745 1058 FunFam MDIS1-interacting receptor like kinase 2 847 1044 - -
Seca2g00745 1058 Pfam Leucine rich repeat 312 371 IPR001611 GO:0005515
Seca2g00745 1058 Pfam Leucine rich repeat 455 515 IPR001611 GO:0005515
Seca2g00745 1058 SUPERFAMILY RNI-like 345 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00745 Seca-Chr2 11469039 11473008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00745 11 940 Receptor kinase-like Gene Family AT4G08850 45.005 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca2g00745 Pkinase 3.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00745 - - gmx:100814634 1439.48