Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00707 ATGGATCCCTTTAAAGGACAAGGAGGCATTCAGATGCTGCTAACTGCTGAACAAGAAGCCCAACACATTGTTTCTACTGCAAGAAATTTGAGGACTCAAAGGTTGAAGCAGGCAAAAGAAGAGGCTGAGAGGGAGGCAGCTCAATACAGATCTCATATGGAAGATGAATATCAAAAGTCAATTTCAGAGACCACTGGAAGCTCTGGATCTAATGTAAAAAGGCTTGAGGAGGAAACAGAGGGTAAGATTAAGAATTTAAAGAAATCAACTTCAAAGGTCTCAACAGATGTTGTTGAAATGCTTCTCAAGTATGTTACAAATATTAAAACATAA 333 0.3844 MDPFKGQGGIQMLLTAEQEAQHIVSTARNLRTQRLKQAKEEAEREAAQYRSHMEDEYQKSISETTGSSGSNVKRLEEETEGKIKNLKKSTSKVSTDVVEMLLKYVTNIKT. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00707 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca2g00707 110 MobiDBLite consensus disorder prediction 34 89 - -
Seca2g00707 110 MobiDBLite consensus disorder prediction 73 89 - -
Seca2g00707 110 Coils Coil 32 59 - -
Seca2g00707 110 Gene3D - 3 110 - -
Seca2g00707 110 NCBIfam V-type ATPase subunit G 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca2g00707 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 58 IPR028987 -
Seca2g00707 110 FunFam V-type proton ATPase subunit G 3 110 - -
Seca2g00707 110 MobiDBLite consensus disorder prediction 34 59 - -
Seca2g00707 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00707 Seca-Chr2 10597859 10599147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00707 1 109 Primary Pumps ATPases(2) AT3G01390 57.798 4.73e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00707 K02152 - gmx:100818549 185.652