Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00704 ATGGGATTGGGTGCTGCTGCTTCTTCCTCTTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTGCTCCCATTTCTGGTCGTCGGCGCTTCGATCCAAGCGCCTCGTTTCGCCGGCGGAGAAAGCCGCCCGCGACAGTTCCGGTCGGGGCCTCTCCCGCCGGCTCGGCGTCCTCGACCTCGTCCTTCTCGGGATCGGAGCCTCCATCGGCGCCGGCATCTTCGTCGTCACCGGCACCGTCGCACGCGACGCCGGACCGGGAGTAACAATAAGCTTTCTACTTGCTGGAGCATCCTGTGTTATAAACGCACTCTGTTATGCTGAGCTAGCTTCTCGATTTCCTGCTGTTGTTGGAGGGGCATATCTATATTCATATACAGCTTTTAATGAACTAACAGCTTTTCTGGTTTTTGCACAATTAATGCTTGACTATCATATTGGGGCAGCTAGTATAGCAAGAAGCCTAGCAAATTATCTAATAAATATTCTAGAGCTCTTCCCTCTTTTCAAAGATAACATCCCAAAATGGATTGGACATGGTGAAAACATTGGAGATGTGCTATCCATCAATGTCTTGGCTCCGATTCTCCTAATGCTTCTCACTTTGATTCTCTGTTGGGGTGTTGAGCAATCATCGGCTGTGAATTCTTTTATGACAGTGACCAAGATAGTCATTGTTATCATTGTCATTCTTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCGTTTGCTCCAAATGGTGTAAAAAGCATATTTACAGGTGCTACCATAGTCTTCTTTGCATATGTCGGATTTGATGCAGTTGCCAATTCTGCTGAAGAATCTAAGAGGCCACAGCGGGATTTGCCGATAGGCATAATTGGAAGCCTCTTAGTATGTATTTCACTGTACATTGGAGTATGCTTAGTGATTACTGGAATGGTTCCATACACGCTTCTAGGAGAAGACGCCCCTTTGGCTGAAGCTTTTACATCTAAGGGATTAAAATTTGTATCTGTTCTGATTAGCATTGGTGCTGTTGCTGGACTTACAACAACACTCCTTGTTGGTCTCTACGTTCAGTCTCGGCTATATCTTGGGCTTGGCAGGGATGGTTTGCTACCCTCAATATTTGCTAGAGTTCACCCCAAACGCCGCACCCCTATTCATTCTCAGGTTTGGGTTGGCTGTGTTGCCAGTGTTTTGGCTGGGCTATTGAATGTGCATATGCTCTCACACATTCTTTCTGTTGGTACACTGACTGGATATTCAGTTGTCTCGGCATGTGTTGTTGTACTTCGTTGGAAGGATAAGTCAAACAGCCAAGTATCATCTTCAGCAAAGCGGGAAGGAGTAATTTGCCTCATTGCAATTGCTGTTTGTGGATTTGCTGCGGGGCTCTTCTTCCGTTATGATGCTTCTCCCATTTTTCTGATTCTGGCTATAGTTGTTGCTGCTGGTGCTTGTGCTGCTCTTCTTTTCCGCCAGGTAAGTGTTATTTTATATTTTATTAATTGCCTGTTGCCAAATGCTTGGGTTAAAAATTATTATTTTTTAATCTTTATCCGGGAATTCTCTCAAGCACAGCTGTGGGGTTATCTCTCGAGTCTATTTCCTTTACGACCAACCAGCATTTGGTAA 1629 0.453 MGLGAAASSSSSSSSSSSSSSCCSHFWSSALRSKRLVSPAEKAARDSSGRGLSRRLGVLDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFLLAGASCVINALCYAELASRFPAVVGGAYLYSYTAFNELTAFLVFAQLMLDYHIGAASIARSLANYLINILELFPLFKDNIPKWIGHGENIGDVLSINVLAPILLMLLTLILCWGVEQSSAVNSFMTVTKIVIVIIVILAGAFEVDVSNWSPFAPNGVKSIFTGATIVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCISLYIGVCLVITGMVPYTLLGEDAPLAEAFTSKGLKFVSVLISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFARVHPKRRTPIHSQVWVGCVASVLAGLLNVHMLSHILSVGTLTGYSVVSACVVVLRWKDKSNSQVSSSAKREGVICLIAIAVCGFAAGLFFRYDASPIFLILAIVVAAGACAALLFRQVSVILYFINCLLPNAWVKNYYFLIFIREFSQAQLWGYLSSLFPLRPTSIW. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00704 542 Gene3D Amino acid/polyamine transporter I 52 500 - -
Seca2g00704 542 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 47 491 - -
Seca2g00704 542 Pfam Amino acid permease 56 466 IPR002293 GO:0016020|GO:0022857|GO:0055085
Seca2g00704 542 MobiDBLite consensus disorder prediction 1 20 - -
Seca2g00704 542 PIRSF AA_transporter 40 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00704 Seca-Chr2 10563025 10567148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00704 13 498 Organic Solute Cotransporters AT1G05940 72.505 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00704 K03294 - gmx:100804988 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00704 2 10563025 10567148 Seca2g00704 2 10563025 10567148 ECH
Seca10g02831 10 37024404 37026083 Seca2g00704 2 10563025 10567148 PCT