Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00671 ATGGAGGCTATGTCAAAAATTTCTAGTCCTAGTGGTCCAGAGATAGAAGAGAAGAGAGTTACTTCCATTTCCCATGAAGATGATTTCTGTGCTCAAGAGGGTAGAAAGGAAGATAGACTCAATTCTGCTAAAACTGAGATGGGTGAGGTGAAAGAAGAAAATGAGAGATTGAAGATGATGTTGGAAAGAGTAGAAAAGGATTACCACTCCCTTCAACTTCGTTTCTTTGACATCCTTCAAAAAGAAGTTTCTAACAAAGGTGTAGCTGATGATTCATCTACTTCCCATGATGAAACTGAAGAGCCTGAACTTGTGTCACTTTGTCTTGGAAGAAGTCCAAAGGAGTCTAAAAAGGAAGCAAAAATTGGAAACTCCAACAAACTTTATGAAGAAAAAGAAGATCAAGAAGTCAACCTTACTCTTGGATTAGACTCCAAATATATGTTGTCAATGGAGCTAGTGCCTGATTTGAGCCCCATGAACAGCTCAGAAGAACCAAAGGAAGCAGAAGCAGAAGGAGAAAGAACTTTGTCAACAAATAAATCAGCAAAAGTTATAAATGTAAATGATGAAATTACAGATCAAATGCCTGCCAAGAGAGCCAGGGTATCTGTGAGAGCTAGATGTGACACTCCCACGATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAGATAGCAAAAGGAAATCCATGTCCAAGGGCATACTATCGTTGCACAGTTGCACCATCATGTCCAGTTAGGAAACAGGTGCAAAGATGTGCTGAGGACTTGTCCATCTTAATCACTACATATGAAGGAACTCACAACCACCCACTTCCAGTGTCAGCCACAGCTATGGCTTCCACAACTTCTGCTGCTGCTTCAATGTTGTTGTCAGGTTCTTCAACATCTCAACCTTCAGGTCACAATTCTGCATCTTTTGGAAATACTCCCAGTACCACAATACACAATGGTCTGAGTTTCAGTCATCAATTTGATGAATCAAGAGCAAAACAAGTTTTCTTACCACCAAACCATGCCTCATCACATTTGTTCCCAACAGTAACTCTAGACCTCACTTCTTCCTCATCCACTCCATCAACTCATGTCAACCGTTTACCTTCAAGCCAAAGATTTTCTCCCACTAGTCTCAGCTTTTGCCCCCCAGAGCCCAACTTCACACCATCAATTTGGGGTAAGGGATTCCCTAACAATGGCACAATGCCTATTGAAAAAGCCCAAATTAGGCCAATTATGCAGGGGAACCATTTCCAAGAACAATTCTATCAACAACAATGCATGACAAACCAAACTCCTTCTAGGGAGGTTTTGGCTGAAACAATAACCAAAGCAATCAGCACAGATCCAAGCCTTCGTTCAGTAATAGCTGCTGCAGTTTCATCAATAGTAGGACAAGGATCAACAAGTGGGAACCAAGAAGGAGGAGAGAATGTTATAGGTTCAGGGTTGAATTTGAAACTTGGGGAGCATCCTCATCATCAATTGGTTTCATCTAATAATATGTTGAATCAGAATGGGAAAGGATGCTTAACAAGCTACTACAAAAGGTTGTCCTCTACAAGTTCCCAAGGCAGAAACTTCATGCTTCTCCAACCCACTTTGCCATTTTCTTTATCCAAGAATAGCACAAACACACCTTCTTCCATTGTTAATCAGATTAACCCTTATGATCCAGATGTGAACATACATCATTAG 1701 0.4074 MEAMSKISSPSGPEIEEKRVTSISHEDDFCAQEGRKEDRLNSAKTEMGEVKEENERLKMMLERVEKDYHSLQLRFFDILQKEVSNKGVADDSSTSHDETEEPELVSLCLGRSPKESKKEAKIGNSNKLYEEKEDQEVNLTLGLDSKYMLSMELVPDLSPMNSSEEPKEAEAEGERTLSTNKSAKVINVNDEITDQMPAKRARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCAEDLSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPSGHNSASFGNTPSTTIHNGLSFSHQFDESRAKQVFLPPNHASSHLFPTVTLDLTSSSSTPSTHVNRLPSSQRFSPTSLSFCPPEPNFTPSIWGKGFPNNGTMPIEKAQIRPIMQGNHFQEQFYQQQCMTNQTPSREVLAETITKAISTDPSLRSVIAAAVSSIVGQGSTSGNQEGGENVIGSGLNLKLGEHPHHQLVSSNNMLNQNGKGCLTSYYKRLSSTSSQGRNFMLLQPTLPFSLSKNSTNTPSSIVNQINPYDPDVNIHH. 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00671 566 SMART WRKY_cls 214 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g00671 566 Pfam WRKY DNA -binding domain 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g00671 566 MobiDBLite consensus disorder prediction 156 176 - -
Seca2g00671 566 Coils Coil 40 74 - -
Seca2g00671 566 MobiDBLite consensus disorder prediction 294 313 - -
Seca2g00671 566 ProSiteProfiles WRKY domain profile. 209 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g00671 566 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 475 IPR044810 GO:0003700
Seca2g00671 566 MobiDBLite consensus disorder prediction 1 51 - -
Seca2g00671 566 MobiDBLite consensus disorder prediction 18 51 - -
Seca2g00671 566 FunFam probable WRKY transcription factor 31 199 276 - -
Seca2g00671 566 SUPERFAMILY WRKY DNA-binding domain 207 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g00671 566 Gene3D WRKY domain 199 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g00671 566 MobiDBLite consensus disorder prediction 355 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00671 Seca-Chr2 10049091 10052250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00671 47 543 WRKY Transcription Factor Family AT5G15130 42.831 6.45e-91 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca2g00671 WRKY 4.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00671 - - gmx:100792084 693.345