Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00610 ATGACTGAAAAACTAGACAACAATTCATCCTTGGATGTGCCTTTACTATATGATTGGAAGCACCATGAGCCAAGGCATGCCATAGATGAGGAGAAAGTTATAGCCTCTCATCCTCCTACAAAAAATACCGTATCTTTCTTTCACACGTGTCTTAATGGACTCAATGCAATATCAGGTGTTGGGATTCTTTCTGTTCCATATGCTCTAGCCTCTGGAGGGTGGTTAAGTTTAGTTCTTCTCTTTTCTATTGCTGCTATAGCATTTTACTCAGGATTGTTGATGAAAAGATGTATGGATAAGAATTCAAACATTAGAACCTATCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGGAGACTAATAGTATCAGTATCTATGTACACAGAACTCTACTTGGTTTCAATAGGGTTCCTGATTCTAGAAGGGGACAACTTGAGTAACTTATTCCCCATTGAGGAGCTTCATGTGGCTGGTTTAGCAATTGGTGGAAAGCAATTATTTGTGATATTGGTTGCTCTTATTATCTTGCCTACTGTTTGGTTGGATAACTTGAGTCTACTTTCTTATATATCTGCAAGTGGTGTGTTTGCTTCAGCTATCATCATCTTGTCAATATCATGGACTGGATCAGTTGATGGAGTTGGTTTTCACCAAAAGGGAACTCTTGTTAATTGGAGTGGGATCCCCACAGCAGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTCCCCACCCTATACAATTCCATGAGAAACAAACACCAGTTCTCTAATGTACTATTTGTATGCTTTGTGATAACCACTGTTGGTTATGCATCCATGGCTATAATTGGTTACTTAATGTTTGGTCCAGAAGTTGAGTCACAGGTACCTTTAAACCTTCCACTAAACAAAATAAGCTCAAAAATAGCAATATATACTACCTTGGTCAACCCCATATCCAAGTATGCTCTGATGACAACTCCAATTACCAATGCTTTGAATGATTTGCTTCCAAGGACATACAAGAACAGAGTCACCAACATCTTAGTCAGCACTGTATTGGTAATCAGCACTGTCATTGTTGCCCTGGTAGTTCCTTTCTTTGGGTATCTAATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGATCTTACATGAAATTTGGGTTTGAGACTGTAGTCATAGTGGCAATAATAGTAGCAGCTATAGCGATGGGAATATCTGGGACATACATATCCGTCAGTGAAATAGTCCAACATTGGTAG 1299 0.3918 MTEKLDNNSSLDVPLLYDWKHHEPRHAIDEEKVIASHPPTKNTVSFFHTCLNGLNAISGVGILSVPYALASGGWLSLVLLFSIAAIAFYSGLLMKRCMDKNSNIRTYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNLSNLFPIEELHVAGLAIGGKQLFVILVALIILPTVWLDNLSLLSYISASGVFASAIIILSISWTGSVDGVGFHQKGTLVNWSGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLFVCFVITTVGYASMAIIGYLMFGPEVESQVPLNLPLNKISSKIAIYTTLVNPISKYALMTTPITNALNDLLPRTYKNRVTNILVSTVLVISTVIVALVVPFFGYLMSLVGAFLSVTASILLPCLCYLKISGSYMKFGFETVVIVAIIVAAIAMGISGTYISVSEIVQHW. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00610 432 PANTHER OS05G0424000 PROTEIN-RELATED 52 414 - -
Seca2g00610 432 Pfam Transmembrane amino acid transporter protein 43 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00610 Seca-Chr2 8650924 8653338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00610 22 429 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.435 1.22e-174 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00610 K15015 - gmx:100794374 705.286