Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00608 ATGTCAGAAAAACTTTTCAACAATTCATCCTTGGGTGTACCTTTACTACCCGAGTGTAAGCACCCTTTGCTAGGACATTCCATAGATGAGGAAAAAGTTGTAGCTTCTCATCCTCACACCAAGAATACCGTATCTTTCTCTCGCACATGTTTCAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTAGCATCTGGAGGATGGTTAAGCTTAGTTCTTCTATTTGCTATTGCTGTTGTAGCCTTTTACTCAGGATTGTTGATGAAAAGATGTATGGATAAGAATTTAGACATTAGAACCTACCCTGATATAGGTGAGCTTGCATTTGGAAAGATAGGAAGGTTAATAGTATCAGTATCTATGTACACAGAACTCTACTTGGTTTCAATAGGGTTCTTGATTCTAGAAGGGGACAACTTGAGCAACTTATTCCCCATTGAGGAGCTTCAAGTGGTTGGTGGTTTTGCAATTAGTGGAAAGCAATTCTTTGTGATATTAGTTGCTCTTATAATTTTGCCTACAGTTTGGTTGGACAACTTGAGTATACTTTCTTATGTATCTGCAAGTGGTGTGCTTGCTTCTGCTATCATCATCTTGTCAATATCATGGACTGCATCAATTGATGAAGTTGATTTTCACCAAAAGGGAACTCTTGTTAATTGGAATGGGATCCCCACATCAGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTCCCAACTCTGTACAATTCTATGAGAAACAAACATCAATTCTCTAATGTCTTACTTGTGTGCTTTATATTAGCTACCATTGGTTATGCATCCATGGCTATAATTGGTTACTTAATGTTTGGTCCAGATGTTGAATCACAGGTAACATTAAACCTGCCACTAAACAAAATAAGCTCAAGAATAGCAATATATACTACCTTGGTTAATCCCATAACCAAGTATGCTTTGATGACAACACCTATTACCAATGCTTTGAATGATTTGCTTCCAAGGACATACAAGAACAGAGTCACCAACATCTTAGTCAGCACTGTATTGGTAATCAGCACTGTCATTGTTGCCCTGGTAGTTCCTTTCTTTGGGTATCTAATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGATCTTACATGAAATTTGGGTTTGAGACAGTAGTCATAGTGGCAATAATAGTAGCAGCTATAGGAATGGGAATATCTGGGACATACACCTCTGTCACTGACATAGTCCACAATTTGTAA 1302 0.384 MSEKLFNNSSLGVPLLPECKHPLLGHSIDEEKVVASHPHTKNTVSFSRTCFNGLNAISGVGILSVPYALASGGWLSLVLLFAIAVVAFYSGLLMKRCMDKNLDIRTYPDIGELAFGKIGRLIVSVSMYTELYLVSIGFLILEGDNLSNLFPIEELQVVGGFAISGKQFFVILVALIILPTVWLDNLSILSYVSASGVLASAIIILSISWTASIDEVDFHQKGTLVNWNGIPTSVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLLVCFILATIGYASMAIIGYLMFGPDVESQVTLNLPLNKISSRIAIYTTLVNPITKYALMTTPITNALNDLLPRTYKNRVTNILVSTVLVISTVIVALVVPFFGYLMSLVGAFLSVTASILLPCLCYLKISGSYMKFGFETVVIVAIIVAAIGMGISGTYTSVTDIVHNL. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00608 433 PANTHER OS05G0424000 PROTEIN-RELATED 52 416 - -
Seca2g00608 433 Pfam Transmembrane amino acid transporter protein 43 421 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00608 Seca-Chr2 8638652 8640635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00608 30 430 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.955 1.26e-171 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00608 K15015 - gmx:100794374 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00608 2 8638652 8640635 Seca2g00608 2 8638652 8640635 ECH