Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00602 ATGAATTTTGGAGGAGTCAACATGCCCCGAGCAAGTGACCTTCTTTTTTGTGTCTCAATCTTTGCTGAAGCAACAAAGGCTAAAATCATTGATTTTGCACATTCAGCTTTTGATGAGTTGTTGAAGATAGGAGTTGTGGGGAAACCTTTATGGCATTCCCAGGTAGACTATAGATTCGAGATTCTAAATGATATTGAATACTTGAGACAATTTGGTCAGGTTGATACAACACTAAGGGAGATTATGAAGTTAGTTGAGGTTAATGACCCTCAAACATTGCCAAGCTTTAACTCATTTGGAACTCAGTACCAAACATCAGAGCCAGCTCATGAAGCAGCTCTGCAGATTGAAGCTTCACGTGAAACTGCATTTGTTAACATGAGTCCAATCAGCCTTGTTGAATTACTTATGGATGTGAATCAATGGTCGAGAGTATTTCACAAACTTGTCTCAAGAGCAACGGTTTTGGTAACTTTTTTAGAGGGAGTGGAAGGAAACTGTGATGGGAAATTGCACGTGATGAACACAGAATTTCATTTGCCTACAGCTCTTGTACGAAGTCGTGAGTGTTATTTTGCAAGGTACTGTAAGCAGTTGTCTCATGAGAAGTGGGTGGTCACTGATGTGTCGTTAGAGAAGTTTTTTCCTTCTCCATCAAACAATTTTCGGAAAAGACCATCAGGCTGTTTGATTACAGGGATGCCTAATGGATTCTCTAAGGTTGTATGGATCGAGCATGTGGAAGCAGATCATAGCCAACTGAGTGATAATTTCAAGCCACTAGTCACCTCTTGTTTGGCTTTTGGTGCACCGCGTTGGATTGCTTCCTTAGTTCGGCATAGTAAATGGTTTGAAAGTCTGAATGCTCCAACAGCTTATGCAGATCAAGGGGTTCGTATACCTCAGAGTGGGTGGACAAGTTTCTTGAAACTGGCAGATAGAATGATGAGAAAATTTTGTGTCAATGTGAGTGCTACTACGGACAATCCATGGAGGAGAATAGCTTCATTTTCTGGTGCTACAGATGTGAAATTGATGATTAAGAATGATTTGGAAGGTTTTGCGAAAAAGCCTCCTGGTACACCGGTGGTTTTCACTACTTCTGTTTGGCTTGAAGTCTCCCCACATCGATTATTCAACTTCCTTCGTCATGAGAGTTCCAGAAGAGAGTGGGACAAGCTTTCACAAACACTTACCATTCAAGAATTCTCATGCATAGTCAAGGACGATCGTTCAGGGAATCGTGTTTCCTTGATGCGAGCAATTACATCTGAGGGCAAGACTGAAATCTTTTATCTGCAAGAGAGTTACACAGACTCCACAGGTTTCTACGTGGTTTATGCTCCACTAGATGAGCAAGCTTTATTAGCTCTTTCAAAAGGATGCAACCCAGACAATGTAATTGTCCTTCCATCAGGGTTTGCTATTCTCCCTGGAGGGTTACCAGTAGAGGGTGAAGGAAAAGATAGAGGCTCTAACACTGGCACTGGAAGTCTTCTAACTGTTGGATTCAATATCATTGATTGGTCCATCACTAATGAGACACCTATCACTCTTGAATCAGTTCAAGCCATCTACGGTGTTATTGCAGATACTGTTACTGCTATAAAGGATGCAGTGCAATATCATAATCGACTCAACAATTGGATGAATGAAGAATGA 1662 0.4128 MNFGGVNMPRASDLLFCVSIFAEATKAKIIDFAHSAFDELLKIGVVGKPLWHSQVDYRFEILNDIEYLRQFGQVDTTLREIMKLVEVNDPQTLPSFNSFGTQYQTSEPAHEAALQIEASRETAFVNMSPISLVELLMDVNQWSRVFHKLVSRATVLVTFLEGVEGNCDGKLHVMNTEFHLPTALVRSRECYFARYCKQLSHEKWVVTDVSLEKFFPSPSNNFRKRPSGCLITGMPNGFSKVVWIEHVEADHSQLSDNFKPLVTSCLAFGAPRWIASLVRHSKWFESLNAPTAYADQGVRIPQSGWTSFLKLADRMMRKFCVNVSATTDNPWRRIASFSGATDVKLMIKNDLEGFAKKPPGTPVVFTTSVWLEVSPHRLFNFLRHESSRREWDKLSQTLTIQEFSCIVKDDRSGNRVSLMRAITSEGKTEIFYLQESYTDSTGFYVVYAPLDEQALLALSKGCNPDNVIVLPSGFAILPGGLPVEGEGKDRGSNTGTGSLLTVGFNIIDWSITNETPITLESVQAIYGVIADTVTAIKDAVQYHNRLNNWMNEE. 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00602 553 Gene3D - 101 279 IPR023393 -
Seca2g00602 553 SUPERFAMILY Bet v1-like 304 479 - -
Seca2g00602 553 CDD START_ArGLABRA2_like 26 281 - -
Seca2g00602 553 SMART START_1 68 283 IPR002913 GO:0008289
Seca2g00602 553 ProSiteProfiles START domain profile. 22 286 IPR002913 GO:0008289
Seca2g00602 553 Pfam START domain 103 281 IPR002913 GO:0008289
Seca2g00602 553 SUPERFAMILY Bet v1-like 115 284 - -
Seca2g00602 553 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 24 541 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00602 Seca-Chr2 8499917 8517218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00602 13 540 Homeobox Transcription Factor Family AT4G04890 42.272 6.61e-122 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00602 K09338 - jre:108992281 487.263