Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00551 ATGGCAGCTTGCATATTCACCGTGTCACAGAATGGAACTGGTGATTTCCAAACGGTGCAGGAAGCTATCGACGCCGTGCCGCTCGGCAACACTCGCCGGACGGTGATTCGGGTGTCTCCGGGAATCTACCGACAGCCGGTGTATGTGCCCAAGACCAAGAATTTCATCACTCTCGCTGGTCTGCGCCCTGAGGACACTGTGCTTACTTGGAACAACACTGCCACCAGAATCGATCACCACCAGATAGGAACTGGCACGTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTCATTGCTGAGAATATTACTTTTGAGAATTCTGCCCCTCAGGTAATGCTTTGGAATGGTTCGGGGCAAGCAGTGGCAATTAGAGTAACAGCAGATCGATGTGCCTTCTACAATTGCAGGTTCCTCGGATGGCAGGACACACTGTACTTACATTACGGCAAACAATATTTGAAGGATTGCTATGTTGAAGGAAGTGTAGACTTTATCTTTGGCAATAGCACTGCTCTTTTGGAGCACTGTCATATCCACTGCAAGTCTCAAGGGTTCATAACTGCGCAGGGTAGAAAATCATCACAGGAAACAACTGGTTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGAAAGTTCATATGCATATCTCGGAAGACCATGGGGACCTTTTGGAAGGGTAGTCTTTGCATACACCTATATGGATCCATGTGTAAGGCATGTTGGCTGGGATAACTGGGGTAAAGTTGAGAATGAAAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCACCCAAACGAGTAACATGGTCTAGAGAATTGGTGGATGAAGAAGCAGAGCAGTTCCTCATGCATCCTTTCATTGATCCAGAACCAGATAGACCTTGGCTTTCTCTAAGAATGGGATTGAGGATTCCATATTCTGCTTAG 954 0.4654 MAACIFTVSQNGTGDFQTVQEAIDAVPLGNTRRTVIRVSPGIYRQPVYVPKTKNFITLAGLRPEDTVLTWNNTATRIDHHQIGTGTFGCGSTIVEGEDFIAENITFENSAPQVMLWNGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYVEGSVDFIFGNSTALLEHCHIHCKSQGFITAQGRKSSQETTGYVFLRCVITGNGESSYAYLGRPWGPFGRVVFAYTYMDPCVRHVGWDNWGKVENERSACFYEYRCFGPGCCPPKRVTWSRELVDEEAEQFLMHPFIDPEPDRPWLSLRMGLRIPYSA. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00551 317 ProSitePatterns Pectinesterase signature 2. 160 169 IPR033131 -
Seca2g00551 317 Gene3D - 3 308 IPR012334 -
Seca2g00551 317 Pfam Pectinesterase 7 297 IPR000070 GO:0030599|GO:0042545
Seca2g00551 317 SUPERFAMILY Pectin lyase-like 3 303 IPR011050 -
Seca2g00551 317 FunFam Pectinesterase 2 310 - -
Seca2g00551 317 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00551 Seca-Chr2 7762010 7766118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00551 5 308 Carbohydrate Esterase AT5G47500 38.436 2.96e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00551 K01051 - gmx:100786786 606.29