Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00526 ATGGGTTCCTATTCCAAGAAAGAGAACCATGTGGTGAGAGATGATAATGATACCCTCTCTGCCATGGTGCTTGGTGCCAATGTGGTCTTTCCTGCAGCACTTAACGCTGCAATTGAACTCAAACTATTTGAGATCATTGCCAACGAAAGTGATGATGATGGTTTCATGTCAGCCTTTGAAATTGCTTCCAAGCTACCAACCAAACACTCTGATGTACCAAATAGGCTCGACCGTCTCCTGCGTTTGCTTGCTAGTTACTCTCTTCTCACTGTTTCCACTCGCACCAATGAGGATGGTAGCATAGTGAGAGTTTATGGGATCTCACCGTGTGGTAGATATTTCTTCCATGATGAAAATGGTGATGGTAATCTTGCTACATTCACATCATTCTTGTGTCACCGTGCATTGTTTGATGTATGGCTAAATTTTAAAGAAGCAATTATCGATCCTGAAGTTGACCTATTCAAGAAAGTTCATGGAACATCTAAGTTTGAGTACTTTGGGAATGATCCAGAAACAAACCACATATTTAACATAGCAATGGCTGATATATGCACATCCCATATGAGAAGAATACTTGAAATATACACAGGATTTGAAGGAATATCAACTTTGGTTGACGTGGCAGGTGGAACTGGACATGGTCTCAAAATGATAATCTCCAAATACCCTTTAATTAAAGGGATTAATTTTGACCTCCCTCAAGTGATTCAAAATGCACCACCATTTATAGGGATTGAGCATGTTGGAGGAAGTATGTTTGAAAGTATTCCACAAGGTGATGCCATAATATTAAAGGCTATATTGCATAACTGGTCAGATGAAAAATGTTTAGAAATTTTAAGCAATTGTCACAAAGCTTTACCAGCAAACGGGAAGGTCATTGTTGGGGAACTTATACTGCCTGAAGATCCTGAACCTACAGAAGAATATAAAATGCTTTCAATTCTTGATAACATCATGTTTATTACACCTGGTGGAAAGGAAAGAACTGCAAAACAGTATGAGGCTTTGGGCAAGCGCTCTGGATTTTCTAGGCTAAATTTTAAGGAAGCAATTATTGATCCTGAGGGATTGAGCATGTTGGAGGAAGTATGCTTGAAAGTATTCCACAAAGGTGATGCCATAATATTAAAGGCTATATTGCATAACTGGTCAGATGAAAAATGTTTAGAAATTTTAAGCAATTGTCAAAAAGCTTTACCAGCAAATGGGAAGGTCAGTGTTGGGGAATTTATATTGCCTGAAGATCCTGAACCTACAGAGGAATATAAAATGCTTTCAATCCTCGATAACATCATGTTTATTACACCTGGTGGAAAGGAAAGAACTGCAAAACAGTATGAGGCTTTGGGCAAGCGCTCTGGATTTTCTAAGTTTCAAGTTGCATGTCGCGTTTTCTCTATTTTGGGTGTGATGGAGTTTTACAAATAA 1434 0.3856 MGSYSKKENHVVRDDNDTLSAMVLGANVVFPAALNAAIELKLFEIIANESDDDGFMSAFEIASKLPTKHSDVPNRLDRLLRLLASYSLLTVSTRTNEDGSIVRVYGISPCGRYFFHDENGDGNLATFTSFLCHRALFDVWLNFKEAIIDPEVDLFKKVHGTSKFEYFGNDPETNHIFNIAMADICTSHMRRILEIYTGFEGISTLVDVAGGTGHGLKMIISKYPLIKGINFDLPQVIQNAPPFIGIEHVGGSMFESIPQGDAIILKAILHNWSDEKCLEILSNCHKALPANGKVIVGELILPEDPEPTEEYKMLSILDNIMFITPGGKERTAKQYEALGKRSGFSRLNFKEAIIDPEGLSMLEEVCLKVFHKGDAIILKAILHNWSDEKCLEILSNCQKALPANGKVSVGEFILPEDPEPTEEYKMLSILDNIMFITPGGKERTAKQYEALGKRSGFSKFQVACRVFSILGVMEFYK. 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00526 477 FunFam Caffeic acid O-methyltransferase 118 363 - -
Seca2g00526 477 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 373 477 IPR016461 GO:0008168
Seca2g00526 477 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 347 IPR029063 -
Seca2g00526 477 Gene3D Vaccinia Virus protein VP39 356 477 IPR029063 -
Seca2g00526 477 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Seca2g00526 477 PANTHER O-METHYLTRANSFERASE 371 467 IPR016461 GO:0008168
Seca2g00526 477 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 363 IPR016461 GO:0008168
Seca2g00526 477 Gene3D Vaccinia Virus protein VP39 117 355 IPR029063 -
Seca2g00526 477 FunFam Caffeic acid 3-O-methyltransferase 2 114 - -
Seca2g00526 477 Gene3D - 2 114 IPR036388 -
Seca2g00526 477 SUPERFAMILY "Winged helix" DNA-binding domain 16 118 IPR036390 -
Seca2g00526 477 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 368 474 IPR029063 -
Seca2g00526 477 Pfam O-methyltransferase domain 372 458 IPR001077 GO:0008171
Seca2g00526 477 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00526 Seca-Chr2 7484081 7489114 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00526 372 469 Monolignol Biosynthesis Gene Families AT5G54160 49.495 1.48e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00526 - - gmx:100798295 513.457