Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00484 ATGGAGCAGTTCTTTACATCCCTTGTGCTCCTCTTTGTGTCCCTCACCTCTCTCTCCCTCTTCTTCCTTTTCTATAGACACAAATCTCCCTTCTCTATCCCCAACCTCCCGCCGGGAAAGATAGGATTTCCGGTGATCGGAGAGAGCCTTGCGTTCCTGTCCACAGGATGGAAAGGGTACCCAGAGAAGTTCATCTATGAGCGCATAGCTAAATACTCTTCCAAAGTGTTCAAAACCTCACTCTTTGGGGAACCTATGGTTATGTTCTGTGGATCTGCATGCAACAAGTTTTTGTTTTCTAACGAGAACAAGCACGTCATGGCTTGGTGGCCTGACAATGTGAACAAGATATTCCCATCGTCAGTTGAAACAAGCTCTAAGGTGGAAGCTAAGAAGATGAGATCCATGCTCCCTCAATACCTCAACGCCAAAGCTCTCCAACGTTATGTTGGTATTATGGACATCATTGCTCAAAGGCATTTTGTTTCTGAATGGGAGAACAAGAAGGAGGTCACTGTATTCCCATTGGCCAAAAGTTATACGTTTTGGTTGGCTTGCCGTTTGTTCATGAGCGTTGAGGATCCAAACCATATAGCAAAATTTGCAGAACCTTTTAATCTAATAGCCTCAGGAATCTTGTCAATCCCAATTGATTTGCCAGGAACACCACTCAATCGAGCAGTGAAGGCCTCTAAGTTTATAAGAGAGGAGCTAATGAAGATCATCAAACAGAGGAAGGTGGATTTGGCTGATGGGAAAGCCTCACCAACACAAGACATATTGTCTCACATGTTATTGACATGCGATGAGAATGGACAGTATATGGCTGAATATGATATCGCAGACAAGATTCTTGGTTTGTTGATTGGTGGCCATGACACTGCAAGTTCTGCATGCACTTTTGTTGTCAAATACCTTGCCGAGCTCCCTCCACATATTTATGAAAAAGTCTATCAAGAGCAAATGGAAATTGCGAAATCCAAATCTCCAGGAGAGTTGTTAAATTGGCATGACATAGAGAAGATGAAGTATTCATGGAATGTAGCGTGTGAAGTAATGAGACTTTCCCCTCCACTTCAAGGAGCTTTTAGGGAGGTCATGAATGACTTTATTTTCAATGGATTCTCAATTCCAAAGGGTTGGAAGGTGTATTGGAGTGCAAGTTCAACACATAGGAATCCAGAGTGTTTTCCAGAGCCAGAGAAATTTGACCCGAGTAGATTCGAAGGGGATGGACCAGCTCCATACACTTTTGTACCATTCGGTGGAGGACCGAGGATGTGTCCCGGAAGAGAGTATGCACGAATGGAAATATTAGTTTTCATGCATAACTTGGTGAAAAGGTTCAAGTGGGAAAAGGTTATTCCTGATGAGAAGATTGTGGTTAATCCTATGCCTATTCCTGCCAAAGGCCTTCCTGTTCGTCTTTATCCTCACTAA 1440 0.4326 MEQFFTSLVLLFVSLTSLSLFFLFYRHKSPFSIPNLPPGKIGFPVIGESLAFLSTGWKGYPEKFIYERIAKYSSKVFKTSLFGEPMVMFCGSACNKFLFSNENKHVMAWWPDNVNKIFPSSVETSSKVEAKKMRSMLPQYLNAKALQRYVGIMDIIAQRHFVSEWENKKEVTVFPLAKSYTFWLACRLFMSVEDPNHIAKFAEPFNLIASGILSIPIDLPGTPLNRAVKASKFIREELMKIIKQRKVDLADGKASPTQDILSHMLLTCDENGQYMAEYDIADKILGLLIGGHDTASSACTFVVKYLAELPPHIYEKVYQEQMEIAKSKSPGELLNWHDIEKMKYSWNVACEVMRLSPPLQGAFREVMNDFIFNGFSIPKGWKVYWSASSTHRNPECFPEPEKFDPSRFEGDGPAPYTFVPFGGGPRMCPGREYARMEILVFMHNLVKRFKWEKVIPDEKIVVNPMPIPAKGLPVRLYPH. 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00484 479 CDD CYP90-like 68 478 - -
Seca2g00484 479 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 PANTHER CYTOCHROME P450 26 36 468 - -
Seca2g00484 479 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 FunFam Taxadiene 5-alpha hydroxylase 27 479 - -
Seca2g00484 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Seca2g00484 479 Pfam Cytochrome P450 37 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00484 479 Gene3D Cytochrome P450 27 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00484 Seca-Chr2 6988849 6993186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00484 26 383 Cytochrome P450 AT5G36110 59.557 1.43e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00484 K20667 - tcc:18589551 803.512