Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00467 ATGGAGAAGACAAAATTGTTTCAAGCACCGACAGAACCAGAAGCGCCCCTTGTTTCAAAGAGGGGAGGACGGGAGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCAATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAGAGCAGCAGGTGCTATAGCGAAACTAATTGCAAAAGAGGGTAAATCGACAACATTAAAATTACCTTATGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAATAGTCGGACAAGTGGGGAATGTTGGGGTAAACCAGAAAAGTTTGAGTAAAGCCGGATCTAAATGTTTGCTAGGTAAACGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTTGTTACTTACCAAGTGCGTGTAATGCAATGCTATTAG 495 0.4242 MEKTKLFQAPTEPEAPLVSKRGGREISSSTSRKPYALEEACTVWEGVLIDQKEESTSTNMPLGTAIHNIEITLGKGGQLARAAGAIAKLIAKEGKSTTLKLPYGEVRLISKNCSAIVGQVGNVGVNQKSLSKAGSKCLLGKRPVVRGVVMNPVVTYQVRVMQCY. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00467 164 Gene3D - 30 121 IPR014722 -
Seca2g00467 164 MobiDBLite consensus disorder prediction 1 31 - -
Seca2g00467 164 Pfam Ribosomal Proteins L2, C-terminal domain 59 153 IPR022669 GO:0003735|GO:0005840|GO:0006412
Seca2g00467 164 SMART Ribosomal_L2_C_2 59 160 IPR022669 GO:0003735|GO:0005840|GO:0006412
Seca2g00467 164 PANTHER RIBOSOMAL PROTEIN L2 57 153 IPR002171 GO:0003735|GO:0005840|GO:0006412
Seca2g00467 164 SUPERFAMILY Translation proteins SH3-like domain 58 153 IPR008991 -
Seca2g00467 164 Gene3D Ribosomal protein L2, domain 3 122 154 IPR014726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00467 Seca-Chr2 6712599 6713395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00467 59 153 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 43.137 1.47e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00467 K02886 - ghi:121226617 212.616