Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00459 ATGGCTGTAGAGGAGTCTGAGCATGTGATTCCGGAGCTAGAAAGGGAGGAAAATTTAATTGCTGCAGCAAGGAATATTGTGATGGCATTAGGATCAAAGAAGAACCTTACTAGTGATGCCAAGAAAATTCTGGCAGATCTTGGCACACAGTTGTCTTCCATAACCATACACAGTGAGAAGGAGGAGGAGGTGGAGGAAGAGGAGGAGCAGGAGGAGGGTGTTAGTGTTATTGAAGAAAGGCTTAGCGTGATTCAGGAGAAAATAATGAGATGGGAGGAAGATCAATCCATGATATGGGATTTGGGACCTGAAGAAGCATCTGAATATCTGAATGCAGCTAATGAAGCCCGCAGATTGATTGAGAAGCTGGAGAGTATGCATTTGAATAAAGAGGATCAAGAGCATAAGATTATGCAGAGAGCTTATAGTGTTCTTCAAACAGCTATGGCAAGGCTTGAAGAAGAATTCAGGAACTTGCTTATCCAAAACAGGCAACCTTTTGAACCTGAATATGTCTCTTTTCGATCCAGTGAGGAAGATGCTGTTGATGAGAACTCTATAGTCTCTTTAGGTGATGAATCGGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCCTCTGAGGAGCATATCATTGATTTAGTTCATCCAGCTGTGATCCCAGATCTCAGGTGTATTGCAAACTTACTGTTTGCTTCTAATTATGTCCAGGAATGTTCCCATGCTTACACCATTGCCCGGAGGGATGCCTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGCATTGAGGATGTCTTGAAAATGGAGTGGGGTACTTTGAATTCAAAGATCAAAAGATGGATTTGGGCTGTCAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAGGTGGCTTAGTGACCAGATTTTTGGGGAGGGTGAGCCTGTCAGTCAAGCCTGTTTTGTTGATGCATCTAAGGCTTCAATATTGCAGCTTCTGAATTTTGGTGAAGCCATGTCTATTGGCCCTCACCAACCTGAGAAATTGTTTAGAATTCTTGACATGTATGAAGTTCTAGCAGACCTTATGCCAGACATTGATGCCTTGTATTCAGATGAGGTTGGTTCCTCTGTTAAAATTGAATGTCATGAGGTTCTCAAGAGATTAGGTGATTGTGTAAGGGCAACATTTATTGAATTTGGAAATGCCATTGCATCAAATGCATCAACAACCCCTTTGGTAGGTGGTGGGATACATCCTTTGACCAGGTATGTTATGAATTATCTCAGGACTCTTACTGACTACAGTGAAACACTTAATCTGCTTCTGAAGGACCAAGAAGAAGAGGATGCCATTTCACTTTCACCTGATATGAGCCCTGGTACAGAAGAAGATAGCAGAAGCCAGGGATCTCCAAGTAGAGTTTCCTCAATGACCCTCCACTTCAGATCAGTTGCTTCAATCTTGGAATGCAACCTTGAGGAGAAGTCCAAGTTATACAAAGAGACTTCTCTGCAGCATTTGTTCTTAATGAACAACCTACATTATATGGCTGAAAAGGTTAAGGGGTCTGAACTTAGGATCATATATGGAGATGAATGGATTCGAAAGCGCAACTTCCAGTTTCAGCAGCATGCACTGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACTTGCTTAAGGATGAGGGAATTCATGTTCCTGGTACAAATTCTATCTCAAAAAGTCTTCTTAGGGAGAGGTTACGAAGCTTCTACCTTGGCTTTGAAGATGTTTATAGGATCCAAACAGCTTGGCTTATCCCAGATGTTCAGCTTCGTGAAGACTTGAGGATTTCTATATCAGTCAAAGTAATCCAAGCTTATAGGACATTTGTTGGAAGGAACAGTAATCACATAAGTGACAAACACCTTAAATACACTGCTGATGATTTAGAAAATTACCTTTTGGATTTCTTTGAAGGATCTCAAAAGTGGTTGCAAAATCCCCATAGGAGGTGA 1995 0.4145 MAVEESEHVIPELEREENLIAAARNIVMALGSKKNLTSDAKKILADLGTQLSSITIHSEKEEEVEEEEEQEEGVSVIEERLSVIQEKIMRWEEDQSMIWDLGPEEASEYLNAANEARRLIEKLESMHLNKEDQEHKIMQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSSEEDAVDENSIVSLGDESVEESLQRDSVSRASEEHIIDLVHPAVIPDLRCIANLLFASNYVQECSHAYTIARRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPVSQACFVDASKASILQLLNFGEAMSIGPHQPEKLFRILDMYEVLADLMPDIDALYSDEVGSSVKIECHEVLKRLGDCVRATFIEFGNAIASNASTTPLVGGGIHPLTRYVMNYLRTLTDYSETLNLLLKDQEEEDAISLSPDMSPGTEEDSRSQGSPSRVSSMTLHFRSVASILECNLEEKSKLYKETSLQHLFLMNNLHYMAEKVKGSELRIIYGDEWIRKRNFQFQQHALKYERASWSSILNLLKDEGIHVPGTNSISKSLLRERLRSFYLGFEDVYRIQTAWLIPDVQLREDLRISISVKVIQAYRTFVGRNSNHISDKHLKYTADDLENYLLDFFEGSQKWLQNPHRR. 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00459 664 Gene3D Exocyst complex component Exo70 87 659 - -
Seca2g00459 664 PANTHER EXOCYST COMPLEX PROTEIN EXO70 71 653 IPR004140 GO:0000145|GO:0006887
Seca2g00459 664 Pfam Exo70 exocyst complex subunit 282 648 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca2g00459 664 SUPERFAMILY Cullin repeat-like 94 652 IPR016159 -
Seca2g00459 664 Coils Coil 74 94 - -
Seca2g00459 664 MobiDBLite consensus disorder prediction 456 471 - -
Seca2g00459 664 Coils Coil 106 162 - -
Seca2g00459 664 MobiDBLite consensus disorder prediction 449 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00459 Seca-Chr2 6637370 6639397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00459 12 664 EXO70 exocyst subunit family AT3G29400 49.850 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00459 K07195 - gmx:100799102 1140.18