Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00450 ATGACTTCTTCTCCCAAGAGTTCCATCAAAATCCATGAGCAATGCCTTGTAACTCCTTCACCATCAGATCAAACTCATCTATCTCTCCCTCTCACATTCTTTGATTTTTTTTGGCTCAAGTTCCATCCAGTTGAACGCATCTTCTACTACACCCTCCCTCTTCCTCTTTCAAACCCATCTTTTTTCTTTGACAATGTGGTTCCAAAGCTTAAAGCCTCACTCTCAAATACCCTCCGACACTTCCTCCCTTTAGCTGGTAACATCGTTTGGCCTTCTGATTCCAACATGCCCTTCATCCAATTCAACCCTGGTGATGGGGTCTCCTTGGTCCTAGCTCAGTGTGATGATGATGATAATGCAAACTTCAATCAAATATTGGAACACAATTCACCTCGTGAAGCCATAAAGTCTCGCAATTTGGTACCCCATTTGGAATCATCAGATTCTTTTGCAGCTGTTGCCTCCCTGCAGATAACTCTGTTTCCAAACAATGGCTTTTCCATTGGCATCAGCACCCACCATGCTGCTCTTGATGGAAAATCCTCAACCATGTTCATCAAGGCCTGGGCTTTCATATGCAATTTAGATGAAAATGAAAAGTTTCCATCTTTGGAACCGTTCTTGGACAGGGAAGTCATCAAAGATCGAAATGGCCTTAACAGTTTCCTCATAAATACCTGGGCAGAACTTTCAGTAAACAGCAACAAGCGAAGCTTGGAGATTATGCCAGACTTATCTGAACCAATGTTGGAGAATTCAGTTCGAGCCACATTCGAGCTCACACGTGGTGATTTGGAGAAGATAAAGAAAAGGGTCTTATCTCAACCAATTGATTCTTCTTCAAAGCCAACAACTTTATCAACCTTTGTTCTTACCTGTGCTTATGTTTCTGTCTGCATTGCCAAAGCCATTGAAGAAGCCGAAGGGGAGAAACAGAAATTTGCTTTTGCATTCACAGTGGATTGCAGGGCTCGGTTAGAGTCAGAGCCTCCAATACCTGAGAATTATTTTGGCAATTGTGTTTGTTCTCATATAGTGGATACAGAGTCAGAGGACTTCACAAAGGAAGATGGGGTGGTCCTTGTTGCTAAGAAGATTTATAGTGAAATAAAAATGTTGAATAATAAGGAGAAGAGAGCTATTGATGGAATAGAGACAACGATGTCTAGATTTGTGTCTCTGCTGAGTGAGGGAGTTAAGGCAATGGGAGTTGCAGGGTCAACCCGGTTTGGAGTTTATGGAATTGATTTTGGTTGGGGAAGGCCTTCCAAGGTGGAGATAGTATCGGTAGATAGAGGATTAACCATTGGCATTACAGAGAGCAAGGATGGGAAGGGTGGTGTTGAAGTTGGGCTTGTTCTTAATAAGCATGTAATGGGTCTGTTTTCTACTTTTTTTCATGCAGGGTTATGCTTTGACTGA 1422 0.4226 MTSSPKSSIKIHEQCLVTPSPSDQTHLSLPLTFFDFFWLKFHPVERIFYYTLPLPLSNPSFFFDNVVPKLKASLSNTLRHFLPLAGNIVWPSDSNMPFIQFNPGDGVSLVLAQCDDDDNANFNQILEHNSPREAIKSRNLVPHLESSDSFAAVASLQITLFPNNGFSIGISTHHAALDGKSSTMFIKAWAFICNLDENEKFPSLEPFLDREVIKDRNGLNSFLINTWAELSVNSNKRSLEIMPDLSEPMLENSVRATFELTRGDLEKIKKRVLSQPIDSSSKPTTLSTFVLTCAYVSVCIAKAIEEAEGEKQKFAFAFTVDCRARLESEPPIPENYFGNCVCSHIVDTESEDFTKEDGVVLVAKKIYSEIKMLNNKEKRAIDGIETTMSRFVSLLSEGVKAMGVAGSTRFGVYGIDFGWGRPSKVEIVSVDRGLTIGITESKDGKGGVEVGLVLNKHVMGLFSTFFHAGLCFD. 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00450 473 Gene3D - 250 472 IPR023213 -
Seca2g00450 473 Gene3D - 8 240 IPR023213 -
Seca2g00450 473 PANTHER - 9 470 - -
Seca2g00450 473 Pfam Transferase family 9 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00450 Seca-Chr2 6337983 6339404 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00450 9 466 Monolignol Biosynthesis Gene Families AT5G48930 25.800 8.10e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00450 - - gmx:100813762 598.586