Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00447 ATGGCTTCTTCTCCCAAGAGCTCTATCAAAATCCATGACCACTGCGTTGTAACTCCTTCACCATCAGATCAAACTCATCTATCTCTCCCTCTCACATTCTTTGATTTGTTTTGGCTCAAGTTTCATCCAGTTGAACGCATCTTCTACTACACCCTCCCTCTTCCTCTTTCAAACCCATCTTTTTTCTTTGACAAAGTGGTTCCAAAGCTCAAAACCTCACTCTCTCAAACCCTCCAACACTTCCTCCCTTTAGCTGGTAACATTGTTTGGCCTTCTGATTCCAACATACCCATCATCCAATTCAACCCTGGTGATGGGGTCTCCATGGTCCTAGCACAGTGTGATGCTGATGAAAATGCAAACTTCAATCAAATATTGGAACACAATTCAGCTCGTGAAGCCATAGAGTCTCGCAATTTGACACCCCACTTGGAATCATCAGATTCTTTTGCAGATGTTATCTCCCTGCAGATAACTCTGTTTCCAAACAGTGGCTTTTCCATTGGCATCAGCACCCACCATGCTGTTCTTGATGGAAAATCTTCAACCTTGTTCATCAAGGCCTGGGCTTCTATATGTAAATCAGATGAAAATTCACCATCTTTGGTGCCAAAGTTGAAGCCTTTTTTGGACAGAGAAGTCATCAAGGATCCAAATGGCCTTGAAAATTTGTTTATAAACAACTGGGTAGAAATCGCATCCCAATTTGACCCTTCAGGGAACAGCAACAGGAGAAGCTTGAAGATTATGCCAAACCCATCTGAACTAATCATGGATCAATCTTTCCGAGCCACGTTCGAGCTCACACGTGGTGATTTGGAGAATCTGAAGAAAAGGGTGTTATCCATGTGGGACATGGTGGAAGGAGCAGAACCAAATGAAGCAATTGATTCTTCAAAGCCAACAACTTTATCAACCTTTGTTATTACCTGTGCTTATGTTTCTGTTTGCATTGGTAAAGCGATTCAAGAAGCTGAAAAGGATAAACAAAAATTTGGTTTTGGATTCACTGTGGATTGCAGGGCTAGGTGGGAACCTCCAATCCCTGAGAATTATTTTGGCAATTGTGTATGTTCTCATATAGTGGATACAGAGCCAGAGGACTTCACAAAGGAAGATGGGTTAGTCATTGTTGCTAAGAAGATTTATAGTAAAATAAAGAAGTTGGAAGAAGGACCTCTTGATGGAGTTGAGACATTGATGTTTAGATTTATGACTATGGCAATTGAGGGAATTAAAGGAATAGGAGTTGCTGGGTCAACCAGGTTTGGAGTATATGGAATTGATTTTGGTTGGGGAAAGCCTTCTAAGGTGGAGATAGTATCAGTAGATAGAGGATTAACCATTGGCATGACAGAGAGAAAGGATGGGAAGGGTGGTGTTGAAGTTGGGCTTGTTCTTAATAAGCATGTGATGGCACTGTTTTCTACTTTTTTCCATGCAGGGTTATGCTTTGAGTGA 1461 0.4148 MASSPKSSIKIHDHCVVTPSPSDQTHLSLPLTFFDLFWLKFHPVERIFYYTLPLPLSNPSFFFDKVVPKLKTSLSQTLQHFLPLAGNIVWPSDSNIPIIQFNPGDGVSMVLAQCDADENANFNQILEHNSAREAIESRNLTPHLESSDSFADVISLQITLFPNSGFSIGISTHHAVLDGKSSTLFIKAWASICKSDENSPSLVPKLKPFLDREVIKDPNGLENLFINNWVEIASQFDPSGNSNRRSLKIMPNPSELIMDQSFRATFELTRGDLENLKKRVLSMWDMVEGAEPNEAIDSSKPTTLSTFVITCAYVSVCIGKAIQEAEKDKQKFGFGFTVDCRARWEPPIPENYFGNCVCSHIVDTEPEDFTKEDGLVIVAKKIYSKIKKLEEGPLDGVETLMFRFMTMAIEGIKGIGVAGSTRFGVYGIDFGWGKPSKVEIVSVDRGLTIGMTERKDGKGGVEVGLVLNKHVMALFSTFFHAGLCFE. 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00447 486 SUPERFAMILY CoA-dependent acyltransferases 297 450 - -
Seca2g00447 486 Gene3D - 259 485 IPR023213 -
Seca2g00447 486 Pfam Transferase family 9 476 - -
Seca2g00447 486 Gene3D - 8 241 IPR023213 -
Seca2g00447 486 PANTHER - 9 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00447 Seca-Chr2 6303389 6304849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00447 9 479 Monolignol Biosynthesis Gene Families AT5G48930 24.124 1.28e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00447 - - gmx:100813762 653.669