Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00446 ATGGCTTCTCACATCAACAACAACAACATCGACAAAAACATCAAAATCCACGAACACTGCAATGTTGCTCCTTCTGGAATCCAAACATCTCTTTCTCTCAATTTCTTTGACTTGTTTTGGCTCAGGTTCCATCCAGTTGAGCGCATCTTCTTCTACACCCTTCAAACTCCACAATCAAAACCATCTTTTTTCTTCAACAAACTCATTCCAAAGCTCAAAACTTCACTCTCCCTCACCCTTCAACACTTCCTCCCTCTAGCTGGCAACATCGTTTGGCCTTCAGAATCCCCAAAACCCATTGTCAAATACACCCCTGCTGTTGATGATGGTGTTTCACTGGTGATTGCAGAGTCTGATGCTGACTTCAACAACATGTTGGAACACAACTCACCCCATGAAGCTTCAAAGTCTCGTTCTTTTGTACCCCACTTGGAATCAGCTGATTCCTCTGCTTCTGTTATTTCCCTTCAAATCACTCTGTTTCCAAACAGGGGATTCAGCATCGGCATCAGCACTCACCATGCTGTTCTTGATGGGAAATCTTCAACTATGTTCATGAAGGCCTGGGCCTCTATATGTAAAACCATTGATGAATCTGAATCTGAACCACCATCTTTGATGCCAGAGTTAGAGCCTTTCTTTGACAGGGAAATCATCAAAGACAAAGATCCAAATGACATTGGCATTTCTATTGCAAATAATTGGTCTGAGTTCTTAGCTAAAATGTTCCCTTCTGAAAACAGTGACGGACGATGCTTAAAGATTCTACCTTTCCAACTAAAACTGAAGGACTCAGTTCGAGCAACATTCGAGCTCACACGTGAAGATTTGGAGAAGATAAAGAAAAGGGTGTTATCCATGTGGGATAGAGCAGTAGTAGAAGAAGAATCAATAATCGATTCTTCAAAGCCAGAAACTTTATCAACGTTTGTTCTCACATGTGCTTATGTTCTTGTTTGTGTTGCTAAAGCAATTCAAGGAGTTGAAAAGGAGAGAAACAAGTTTTCTTTTGCATTCACTGTGGATTGCAGGGCGAGGTTAGAGCCTCCAATCCCTGATAACTATTTTGGAAACTGTGTATGGGGCTATTTCGTGGATGCAAAACCAACAGATTTTACAAAGGAAGATGGGCTCTTTTTTGTTGCCAAGAGCATTCATGACCAAATAAAAGTATTAGGTAAGGAGGGTTTTGAAGGATCCAACTCCAAGTATGGGCTTTCTAAATATAAATCTTTGGCAAGTGAAGGTGTTGAAATAATTGGAGTGGCAGGGTCAAATAGGTTTGGTGTTTATGGAATTGATTTTGGTTGGGGAAGGCCTTCCAAGGTGGAGATAACATCGGTGGATAGAGGTTTAACTATTGGGTTGGCAGAGAGTAAGTGTTGGAAAGGTGGAGTTGAAGTTGGGCTCGTTCTGAATGAAAATGTGATGGATATCTTTAGTACTCTGTTTCATGGAGGACTATGTGATGTGATGGCTTCTCACATCAACAATAACAACAACGACAAGAACATCAAAATCCACGAGCACTGCAATGTTGCTCCTTCATCTGGAACCCAAACATCTCTTTCTCTCAATTTCTTTGACTTGTTTTGGCTCAGGTTCCATCCAGTTGAGCGCATCTTCTTCTACACCCTTCAAACTCCACAATCAGACCCATCTTTTTTCTTCAACAAACTCGTTCCAAAGCTCAAAACTTCACTCTCCCTCACTCTCCAATACTTCCTCCCTCTAGCTGGCAACATCGTTTGGCCTTCAGAATCCCCAAAACCCATTGTCAAATACACCCCTGGTGTTGATGACGGTGTTTCACTGGTGATTGCAGAGTCTGATGCTGACTTCAACCACATGTTGGAACACAATTCACCCCATGAAGCTTCAAAGTCTCGTTCTTTTGTACCCCACTTGGAATCAGCTGATTCATCTGCTTCTGTTATTTCCCTTCAAATCACTCTGTTTCCAAATAGGGGATTCAGCATCGGCATCAGCACTCACCATGCTGTTCTTGATGGGAAATCTTCAACTATGTTCATGAAGGCCTGGGCTTCTATATGTAAAACCATTGATGAATCTAAATCTGAACCACCATCTTTGGTGCCAGAGTTAGAGCCTTTCTTTGACAGGGAAATCATCATAGACAGAGATCCAAATGACGTTGGCATTACTATTGCAAATAATTGGTCTGAGTTCTTAGCTAAAATGTTCCCTTCTGAAAACAGCGACGGACGATGCTTAAAGATTCTACCTTTCCAACTAAAACTGAAGGATTCAGTTCGAGCAACGTTCGAGCTCACACGTGAAGATTTGGAGAAGATAAAGAAAAGGGTGTTATCCATGTGGGATAGAGCAGTAGTAGAAGAAGAGTCAATAATCGATTCATCAAAGCCAACAACTTTATCAACATTTGTTCTCACATGTGCTTATGTGCTTGTTTGTGTTGCTAAAGCCATTCAAGGAGTTGAAAAGGAGAGAAACAAGTTTTCTTTTGCATTCACCGTGGATTGCAGGGCGAGGTTAGAGCCTCCAATCCCTGATAACTATTTTGGAAATTGTATATGGGGCTATTTCGTGGATGCAAAACCAACAGATTTTATAAAGGAAGATGGGCTCTTTTTTGTTGCTAAGAGCATTCATGATCAAATAAAAGTGTTAGGTAAGGGGGGTTTCGAAGGATCCAATTCCAAGTATGGGCTTTCTAAATATAAATCTTTGGCAAGTGAAGGTGTTGAAATAATTGGAGTGGCAGGGTCAAATAGGTTTGGTGTTTATGGAATTGATTTTGGTTGGGGAAGGCCTTCTAAGGTGGAGATAACATTGGTGGATAGAGGTTTAACTATTGGGTTGGCAGAGAGTAAGTGTTGGAAAGGTGGAGTTGAAGTTGGGCTCGTTCTGAATGAAAATGTGATGGATATCTTTAGTACTCTGTTTCATGGAGGACTATGTGATGTGATGATTGATGGGAGCAATATAAAACATAAAAATTTTGTTTAG 2991 0.4099 MASHINNNNIDKNIKIHEHCNVAPSGIQTSLSLNFFDLFWLRFHPVERIFFYTLQTPQSKPSFFFNKLIPKLKTSLSLTLQHFLPLAGNIVWPSESPKPIVKYTPAVDDGVSLVIAESDADFNNMLEHNSPHEASKSRSFVPHLESADSSASVISLQITLFPNRGFSIGISTHHAVLDGKSSTMFMKAWASICKTIDESESEPPSLMPELEPFFDREIIKDKDPNDIGISIANNWSEFLAKMFPSENSDGRCLKILPFQLKLKDSVRATFELTREDLEKIKKRVLSMWDRAVVEEESIIDSSKPETLSTFVLTCAYVLVCVAKAIQGVEKERNKFSFAFTVDCRARLEPPIPDNYFGNCVWGYFVDAKPTDFTKEDGLFFVAKSIHDQIKVLGKEGFEGSNSKYGLSKYKSLASEGVEIIGVAGSNRFGVYGIDFGWGRPSKVEITSVDRGLTIGLAESKCWKGGVEVGLVLNENVMDIFSTLFHGGLCDVMASHINNNNNDKNIKIHEHCNVAPSSGTQTSLSLNFFDLFWLRFHPVERIFFYTLQTPQSDPSFFFNKLVPKLKTSLSLTLQYFLPLAGNIVWPSESPKPIVKYTPGVDDGVSLVIAESDADFNHMLEHNSPHEASKSRSFVPHLESADSSASVISLQITLFPNRGFSIGISTHHAVLDGKSSTMFMKAWASICKTIDESKSEPPSLVPELEPFFDREIIIDRDPNDVGITIANNWSEFLAKMFPSENSDGRCLKILPFQLKLKDSVRATFELTREDLEKIKKRVLSMWDRAVVEEESIIDSSKPTTLSTFVLTCAYVLVCVAKAIQGVEKERNKFSFAFTVDCRARLEPPIPDNYFGNCIWGYFVDAKPTDFIKEDGLFFVAKSIHDQIKVLGKGGFEGSNSKYGLSKYKSLASEGVEIIGVAGSNRFGVYGIDFGWGRPSKVEITLVDRGLTIGLAESKCWKGGVEVGLVLNENVMDIFSTLFHGGLCDVMIDGSNIKHKNFV. 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00446 996 PANTHER - 14 488 - -
Seca2g00446 996 SUPERFAMILY CoA-dependent acyltransferases 296 477 - -
Seca2g00446 996 SUPERFAMILY CoA-dependent acyltransferases 788 937 - -
Seca2g00446 996 Gene3D - 754 981 IPR023213 -
Seca2g00446 996 Gene3D - 262 489 IPR023213 -
Seca2g00446 996 Pfam Transferase family 29 481 - -
Seca2g00446 996 Pfam Transferase family 505 973 - -
Seca2g00446 996 Gene3D - 500 732 IPR023213 -
Seca2g00446 996 Gene3D - 10 237 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00446 Seca-Chr2 6284626 6295007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00446 505 972 Monolignol Biosynthesis Gene Families AT5G48930 23.810 3.31e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00446 - - tpra:123889238 1226.08