Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00445 ATGAAAATTGTCGAAGTTTTCAATGTAGCACCTGCTTCTGGATCAAATGAGTTACCTTCTAAAACATCACTTCCTCTTACCTTCTTTGATTTACTATGGTTAAGGTTACCTCCTGTTCAACGCATTTTCTTCTATGAATTTCCTCACCCAACACCACTTTTCTATGATACCCTTCTTCCAAAACTCAAACAATCCCTTTCTCTTGCACTTGGCTACTTCTACCTTCTCTCTGGCCACCTCATTTGGCCCCTTCACTCCCACAAACCTATCATTAACTACACTTCAGGTGACACTGTTTCCCTCATTTTAGCTGAATCTGGTGCTGATTTCAACCATCTAGCAGGCACAGATCTTTGTGAAGCAACAGAAAGTCACCAACTTTTATCCCACTTGACCATATCCCATGAAAAAGCCAGTGTGTTGGCTCTCCAAGTCACTCTGTTTCCAAACTCTGGATTTTCCATTGGAATCACCACGCACCATGCTGTTCTAGATGGCAAAACTTCAACTTCTTTTATCAAAGCCTGGGCTTATCTATGCAACAAGCTAAGAGAAGAATTACCTTCTTCTTTGCCACCTGAATTGGTTCCATTCTATGATAGGGAAGTAGTCAAAGACCCTTCTGAATTAGAGGCAAGATATGTCAGTGATTGGTTAAAGCAGGGTGGACCCAATAACAGAAGCCTAAAGCTTTGGGAATTCCAAGTTCCTGAAGACTCAACTAGAGGCTTATTCCAATTGTCTCGCTCAGATATTGAAAAGCTCAAGCAATTTGTAGTGTCCAAGCAGAAAGGGAAGAAGAATCTTCACTTGTCAACATTTGTGTTATCTGTTGCCTATGCATGGGTTTGCAGAGTGAAAGCAGAGGAAATTGAAAGCGATATAGCTATTTTGGGTGTGAATGTTGATTGCAGGGCTCGCTCAGAACCACCTCTTCCTCCAACATATTTTGGAAACTGTATTGGAGGCACAGGAGCAGTTGCTAAAACGAGAGAATTATTGGGAGAAGATGGACTCATTGTGGCTGTGGAAGCACTGAGTGAAACTTTGGAAAGATTGAAGGATGGGGTGCTGAGTGGAGCAGAAAGTTGGACAACATTGGTGATTGAGGGTCTTGCCACTGGTAGAAAAATAAGTGCTGTTGCTGGGTCACATAGGTTTGAGGTTTATAGCAGTGATTTTGGTTGGGGAAGACCAAAGAAAGTGGAGATGACTTCTATTGACAGAACTGCAGCATATTGTCTTTCAGACAGTAAAAATGGTGATGGAGTTGAGATAGGTTTCGTGTCCAACAAAAGAGCAATGGAGACATTTGCTTCTCTCTTTGTCAAAGGCCTTGCATCTTGA 1347 0.4202 MKIVEVFNVAPASGSNELPSKTSLPLTFFDLLWLRLPPVQRIFFYEFPHPTPLFYDTLLPKLKQSLSLALGYFYLLSGHLIWPLHSHKPIINYTSGDTVSLILAESGADFNHLAGTDLCEATESHQLLSHLTISHEKASVLALQVTLFPNSGFSIGITTHHAVLDGKTSTSFIKAWAYLCNKLREELPSSLPPELVPFYDREVVKDPSELEARYVSDWLKQGGPNNRSLKLWEFQVPEDSTRGLFQLSRSDIEKLKQFVVSKQKGKKNLHLSTFVLSVAYAWVCRVKAEEIESDIAILGVNVDCRARSEPPLPPTYFGNCIGGTGAVAKTRELLGEDGLIVAVEALSETLERLKDGVLSGAESWTTLVIEGLATGRKISAVAGSHRFEVYSSDFGWGRPKKVEMTSIDRTAAYCLSDSKNGDGVEIGFVSNKRAMETFASLFVKGLAS. 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00445 448 Gene3D - 1 228 IPR023213 -
Seca2g00445 448 PANTHER - 2 447 - -
Seca2g00445 448 SUPERFAMILY CoA-dependent acyltransferases 239 446 - -
Seca2g00445 448 Gene3D - 236 447 IPR023213 -
Seca2g00445 448 Pfam Transferase family 15 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00445 Seca-Chr2 6195274 6196620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00445 42 399 Monolignol Biosynthesis Gene Families AT5G48930 26.486 4.58e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00445 - - gmx:100805184 675.626