Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00444 ATGAAAATTGTCGAAGTTTTTAATGTAGCACCTGCTTCTGGATCAAATGAGTTACCTTCTAAAACATCGCTTCCTCTCACCTTCTTTGACTTATTATGGTTAAGGTTACCTCCTGTTCAACGCATTTTCTTCTATGAATTTCCTCATCCAACACCACTCTTCTATGATACCCTTCTTCCCAAACTCAAACAATCCCTTGCTCTTACACTTGGCTACTTCTACCCTCTCTCTGGCCACCTCATTTGGCCCCTTCACTCTCACAAACCCATCATTAACTACACTTCAGGTGACACTGTTTCCCTCACTTTAGCTGAATCTGATGCTGATTTCAACCATCTGGCAGGCACAGATCTTTATGAAGCAACAAAAAGTCACCATCTTTTACCCCACTTGACCATATCCCATGAACAAGCCACTATGTTGGCTCTCCAAGTCACTCTGTTTCCAAACTCTGGATTTTCAATTGGGATCACCTCGCACCATGCTGTTATGGATGGCAAAAACTCAACATCGTTTATCAAATCCTGGGCTTATTTATGCAGCAGGCTAGGAGAAGAATCACCCTCTTCTTTGCCACCTGAATTGATTCCATTCTATGATAGGGAAGTAATCAAAGACCCTTGTGAATTAGAAGCAAAATATGTTAGTGATTGGTTAAAGCAGGGTGGACCCAATAACAGAAGCCTCATGGTTTGGGATCTCCAAGTTCCAGAAGAGTCAATTAGAGGCTTATTCCAATTGTCTCGCTCAGATATTGAAAAGCTCAAGCAATTTGTTGTGTCCAAGCAGAAAGGGAAGAAGAACCTTCACTTGTCAACGTTTGTGTTATCTGTTGCCTTTGCATGGGTTTGCAGAGTGAAAGCAGAGGAAATTAAAAACAAGAGAGTTGTTATGGCTCTGAATATTGACTGCAGGACTCGCTTAGAGCCACCTCTTCCTCCAACATATTTTGGAAATTGTGTTGGGGGAAAACTTGCAATTGCTGAAACAAGAGAATTATTGGGAGAAGATGGACTCATTGTGGCTGTGGAAGTATTGAATGAAGCTTTGGAAACTTTGAAGGATGGAGTGCTGAAAGGAGCAGAGAATTGGACATCTTGGTTGCTTGAAGGTCTTGTTACTGATGATGTCAAGACAATTGGCACTGCTGGGTCACCCAGGTTTGAGGTTTACAGTAGTGATTTTGGTTGGGGAAGACCAAAGAAGGTGGAGATGGCGTCTATAGATAGAACTGCAGCATTTTGTCTTTCAGATAGCAAAAATGGTGATGGAGTTGAGATAGGTTTGGTGTCCAATAAAGCAGCAATGGAGGCCTTTGCTTCTCTCTTTGTCAAAGGCCTTGCATCTTGA 1350 0.4215 MKIVEVFNVAPASGSNELPSKTSLPLTFFDLLWLRLPPVQRIFFYEFPHPTPLFYDTLLPKLKQSLALTLGYFYPLSGHLIWPLHSHKPIINYTSGDTVSLTLAESDADFNHLAGTDLYEATKSHHLLPHLTISHEQATMLALQVTLFPNSGFSIGITSHHAVMDGKNSTSFIKSWAYLCSRLGEESPSSLPPELIPFYDREVIKDPCELEAKYVSDWLKQGGPNNRSLMVWDLQVPEESIRGLFQLSRSDIEKLKQFVVSKQKGKKNLHLSTFVLSVAFAWVCRVKAEEIKNKRVVMALNIDCRTRLEPPLPPTYFGNCVGGKLAIAETRELLGEDGLIVAVEVLNEALETLKDGVLKGAENWTSWLLEGLVTDDVKTIGTAGSPRFEVYSSDFGWGRPKKVEMASIDRTAAFCLSDSKNGDGVEIGLVSNKAAMEAFASLFVKGLAS. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00444 449 Gene3D - 236 448 IPR023213 -
Seca2g00444 449 Pfam Transferase family 15 441 - -
Seca2g00444 449 Gene3D - 1 229 IPR023213 -
Seca2g00444 449 PANTHER - 2 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00444 Seca-Chr2 6179444 6180793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00444 42 439 Monolignol Biosynthesis Gene Families AT5G48930 24.878 3.52e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00444 - - gmx:100805184 707.212