Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00441 ATGTCTGGAAAGGATGAAAACCAAGATTTGCAGAAGCAGATTGGGTGCATCACTGGGTTTTTTCAGCTCTTTGATCGACACCGTTTCCTCACAACCCAACGCACTAATGGTTACATTCAACACACAACTACTTCAGGTGGAAGCAATAATGACATCAAAGAACTCAATAGTAAGACAAAGAATCTGAAGAATGCAAGAGAGAAGCAACAATTCTCCACAGAGTCATCAATAACTTCTTTGTCTTCATCATCTTGTTCATCTAGCATGTCATCCCTTGACTTTAACAAAACAATGCAGACAGAATCACCATCAACCAGTCAAATCAGACTTCCACAAAACCCACATTCACAAGTAGCAAAGAAGCAACATGATAAACCAAGCCAGCACTCCCTTGACATGTATGATATTGTCAAAGACTCAATGCAGAGAGAGACTAAAGGATTGTCTGTGAATACTATGGCTAAAGAGGGAAAGAAGGGTCACACTCATACCTTGAAACACATAGATTCTCCCAGGCCTTTGTGGTCCCAAAAATCTGTTAATGCAGGAGTTATGATTGCCAATGAACCATTACATATTCTTTCAAAGTCCAAGAGAAAACCTTGGGACTCACCAAGACTCTCTTATGATGGAAGGGTCACACAAGACACATTCAAATCCACCACAAAGCATAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGACAAGGATCCATTAGAGGTTTCAATGAAGGAAACAAGGCTGGAAACTTGTTGAAGGGTCCACAAAAAGGGTATGGAAGGAATTCCAGCATAATGATTAACCAGCTGCAAGAACCAGAAACTTCAAAAAGATCATCCAGTGTTGTAGCCAAGTTGATGGGACTGGAAGCACTCCCAGAATGTACACAAACTTGTGGCACTCCAATGGGGACTTCTAGCTTTTCCACCAATAAAATTGAACTCTTGGCAAGATCTGGCACTAGTGATGAACACAAGCAACACCAAAGTGTTGCATCCCCAAGGACATGCCAAGGAATCACCTTGCCTCAGTATAGAAGGGCTGATTCAATCACAAATGTGACACCATATTCAAGATTTGCACTAGAACCAACTCCATGGAGGCAACCTGATGCAAGGCAAAGTTCTCAATTACAAGCTTCCAAAGGAAGTGAATCTAATGTGAAAACCCCCAAGTCCTCTCTCTCTGTATATGGGGAAATTGAGAAAAGGCTAGCAGATCTTGAGTTCAAAAAGTCTGGAAAGGACCTAAGGGCCCTCAAACAGATTCTTGATGCAATGCAGAGATACAATGATCCATTAGATACTGCAAGAGATCAAGCTTCAAATTCACCATCTGACACTAGGAATAATACTAGTCTCAGTGAAGGCTCAAAAGTACAAAGTCCAAGAATACCACAAAAGGACCCAGCATCTATCACTGTTGAAATGCCAAATTCAACCCGGGGTAGTAAATTTCCAATTGTCATCATGAAACCAGAAAAAGTTACTAGAAAAGCCAACAACAATCCTTCTTCCACAGAAATGTCAATTCATGGTAAATCTGGTCTCAGCAAGTCTTCCCCTAGTAATCTCACAAATGGAAGATTGGTTGACAAGCAAAAAGCTAAAGGTATCAGTTCCACAACAAAAAATATCAAGGACCCTTTTGGTCAACCAGTTCGTTCAACTGATAAGAATAATAACTTGAGAAGTCCAAAATTGATGCAATCCATGAAAGTTCAACATGACAGCAATGGAGAAAACACCACCAACTGTGGTAATGTAACAGTGCCTGGGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCTCCACCAACTAGTCCATCATCAGATTCCAGTGTCAACAGAAGACAACATAATAGGCAACTTGTGGAATTGTCTTCCCCAAGTACAACACCTAGACAAAATTTTTCTTCTTTGCAGGAAAGAAATGAATGTTTCGGTGAGATCAGCTTTCACAGGAGGGATTTTAAGCATCATGTTAATGTCATTTCTCCAGATTTTGACAGCAGAAGAAGCTTGGCTGATCATAGTGACATTGAAGTCATTCGCTTTGATCAATTAGGAAATATCAATAGCACTTCTATCCAATTGAGTAGCCTGAATCAAAATAATGCATTTGAAGAGTTGAGGAAGGAAAGCTCTAAGGCTGAGACAATAGTCACTGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTGCATTTTATAGGGAAGACCCTCCATCTCCAGTGAAAAAGAAATCAGACATCTCAAAAAATTTAGGTGAAGGTATAAGCATTGATGAAGATAGTGATAGAGACATGAACACCCAGAATTTAATTCAAATACTTCAAGAAATTGACTGGATAGATGAGAAATTAATCAATTTCACTAACAGCATGGATCCTGACCATAAGTATATATCAGAAATACTGTTAGCATCAGGTCTGTTCAGTGGTCACAGCTCTAGCCAGATACTTCATTCACCAGGTTACTTGATTAACCCAAAGTTGTTCTATGCACTTGAACAAATGAAGACAAATAAGAGGCATTTCAATGTTGAAGACAGTTCCCAGAAAATTGCTAGGATTGTTAATCCTGAGCAAATTCAAAGGAAGCTCATATTTGATTTTGTTAATGACATTTTAGTTCAGAGACTGATATTGGAGAGCTCTTCCACACTGTGGTGCCTACCAAATGAGCTAACAGGCAGAAAACTAAAAGGGAAGAAGCTTTTGGATGAGCTATGTACAGAAATAGATCAGTTACAACCTCAAAATAGGAATGTCAGCCTAGTTGGTGAGGATGAAAATTTGACAAGTCTCTTGTGCAGAGATTTGAAGCATCACCACACAATTTGGACTAACTGCTGCATTGAGATACCAAATCTTGTGTTGGATATTGAACGGTTAATCTTTAAAGATTTGATAACTGAAGTTGTGACAAGTGAAGTAGAAAACCATCCTGATAGGCATTGCAGGCAACTACTGTTTCCCAAGTAG 2997 0.3981 MSGKDENQDLQKQIGCITGFFQLFDRHRFLTTQRTNGYIQHTTTSGGSNNDIKELNSKTKNLKNAREKQQFSTESSITSLSSSSCSSSMSSLDFNKTMQTESPSTSQIRLPQNPHSQVAKKQHDKPSQHSLDMYDIVKDSMQRETKGLSVNTMAKEGKKGHTHTLKHIDSPRPLWSQKSVNAGVMIANEPLHILSKSKRKPWDSPRLSYDGRVTQDTFKSTTKHKELPRLSLDSRQGSIRGFNEGNKAGNLLKGPQKGYGRNSSIMINQLQEPETSKRSSSVVAKLMGLEALPECTQTCGTPMGTSSFSTNKIELLARSGTSDEHKQHQSVASPRTCQGITLPQYRRADSITNVTPYSRFALEPTPWRQPDARQSSQLQASKGSESNVKTPKSSLSVYGEIEKRLADLEFKKSGKDLRALKQILDAMQRYNDPLDTARDQASNSPSDTRNNTSLSEGSKVQSPRIPQKDPASITVEMPNSTRGSKFPIVIMKPEKVTRKANNNPSSTEMSIHGKSGLSKSSPSNLTNGRLVDKQKAKGISSTTKNIKDPFGQPVRSTDKNNNLRSPKLMQSMKVQHDSNGENTTNCGNVTVPGSPRLQKKFGLERRSPPTSPSSDSSVNRRQHNRQLVELSSPSTTPRQNFSSLQERNECFGEISFHRRDFKHHVNVISPDFDSRRSLADHSDIEVIRFDQLGNINSTSIQLSSLNQNNAFEELRKESSKAETIVTAEQPSPVSVLDAAFYREDPPSPVKKKSDISKNLGEGISIDEDSDRDMNTQNLIQILQEIDWIDEKLINFTNSMDPDHKYISEILLASGLFSGHSSSQILHSPGYLINPKLFYALEQMKTNKRHFNVEDSSQKIARIVNPEQIQRKLIFDFVNDILVQRLILESSSTLWCLPNELTGRKLKGKKLLDELCTEIDQLQPQNRNVSLVGEDENLTSLLCRDLKHHHTIWTNCCIEIPNLVLDIERLIFKDLITEVVTSEVENHPDRHCRQLLFPK. 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00441 998 PANTHER LONGIFOLIA PROTEIN 4 994 IPR033334 GO:0051513
Seca2g00441 998 MobiDBLite consensus disorder prediction 221 260 - -
Seca2g00441 998 MobiDBLite consensus disorder prediction 319 338 - -
Seca2g00441 998 MobiDBLite consensus disorder prediction 498 592 - -
Seca2g00441 998 MobiDBLite consensus disorder prediction 369 394 - -
Seca2g00441 998 Pfam Domain of unknown function (DUF4378) 802 977 IPR025486 -
Seca2g00441 998 MobiDBLite consensus disorder prediction 68 117 - -
Seca2g00441 998 MobiDBLite consensus disorder prediction 435 481 - -
Seca2g00441 998 MobiDBLite consensus disorder prediction 64 128 - -
Seca2g00441 998 MobiDBLite consensus disorder prediction 607 644 - -
Seca2g00441 998 MobiDBLite consensus disorder prediction 435 644 - -
Seca2g00441 998 MobiDBLite consensus disorder prediction 362 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00441 Seca-Chr2 6127634 6132563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00441 127 983 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 32.082 1.82e-88 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00441 - - gmx:100808151 1358.2