Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00436 ATGAGCCTCTGTGTGCTACTGTTTTTTCTTCCGCTGTTGTTTCCTCTAGAGGTTAACTCATACGTCCCTGTTGAAAATTATGCTGTTAACTGTGGTGACTCAAATGATGTTACCATTTATAATCGAATCTGGGTTGGAGACGTTAGCACCAAGCAGTACTTTTCTATCATTGAACCACAAACAGGGCAACCATCTGTCAAAGCCGAGGCTCTTAACCGTTTTCCAGGTAACCCAGTATTTCCGGTTGGCTCCGCACGCCTCTCTCTCTCCAAATTCACATACTCCTTTGTTAATGTCACTAGCGGCCCAAAGTTCCTTCGCCTTCACTTTTATCCAATGTCATATCTTAACTTTGAACCCTACAACGCCCTCTTCTCTGTCATAGCAGGCAATTTCACCCTTCTCAAAGACTTCAACGCCTCACTTTGGGTTCACAGTGATGAAAAGACAATCAGCAAAGAATACTGTCTCAACGTGGAAACAGGTGAGAGGCTAAACATAACCTTCCTTCCCAGCAATAACCACTCTGATGCTTATGCTTTTATCAACGGGATCGAGGTTGTGTCTATGCCTCCCTTCCTCTATTACACTAATCTCAGTGACTTAGATTATAAATTTAACTCATTCCAAATTCAAAAGGACAAAGCTCTGGACACACTTTACAGAGTTAATGTTGGTGACAATCAGGTTCCACCGAGCAACGATACTGGCATGTTCCGGAATTGGGACAATGATTATCCTGGCTACTTGGAGAAGCAATACCCACTCAGTGTGTCAACTGGCTATGCACTTCAACTCAACTATAGAAATAATGCTGTTCCCAATTACACAGCACCAGCCGATGTATACTTAACTGCCAGAAGTTACGGGATGGATGCGACCGAGAATTATAATGTAACTTGGACCTTTGAAGTGGATTCACAGTTCACTTATATGGTCAGGTTACATTTCTGTGAGTTTGAGTACTGGCGGATAAAGCACTACGGGGATAGAGCTTTCCAGATTTTTATAGCAGAGACTTTGGCGGAAGTATACGCCGATTTGATCGGCTGGGGTGACGGATTCAACCTAGTTCCTATTCATAGGGATTATGCTGTTGTTATGTCCACGCTAGGAGACTCTAAGAAAGTCAATCTTTCAATCAAGCTACAACAAATGCCAGATATCATAACCAAATACCATGATGTCATATTAAATGGAATCGAGATTTTCAAAATTAGTGACCAAAATAACAATCTTGCCGGTCCGAATCCCGAACCTATTCTATCTCTATCTCATTCTGCACAGAATCCAAAGACCACCACAGTTATCGTTGTCGTGGTTGCAGTTTCAGCCCTCATGGTAGCATCTGTTATTGGCATCATGGTTTTTCAGCGACGAAGAAGGACAAGAGGCCATAACAAGGAAGAAAACTGGTGGAAGAAAAAGACTGAAGAAGACTCATCTTTTCCATCATGTTCGGGTCGCTACTTTACAATCGGAGAGATCAGGGCTGCCACAAACAACTTCGCCGATGTTTCCATCATCGGAGTTGGAGGGTTCGGAAACGTGTACAAGGGTTACATCGATGGAGCCACACCCGTTGCGATCAAACGTCTCAAACCGGATTCTCACCAAGGTGCCAGCGAGTTCATGAACGAGATCGAGTTGCTCTCCCAGCTTCGCCACCTTCATCTCGTTTCCCTCATTGGTTACTGCAACGACGGCGTAGAGATGATCCTCGTCTATGACTTCATGCAACGTGGCACTCTCCGCGAGTATCTCTACAACTCTGATAACCAACCCCTTTCGTGGAAGAAGAGGCTTGAGATCTTATTGGGTGCAGCGAGAGGGTTGCATTATCTTCATACAGGTGCGCAGCACAATATCATTCACCGTGACGTGAAGAGCACCAACATTCTGTTGGATGAAAATTGGGTGGCTAAGCTTTCTGACTTGGGATTATCCAAAGTGGGACCCACTGGAATATCCAAGACCCACGTTACCACGCTTGTGAAGGGGAGCCTTGGGTATTTGGACCCGGAATACTTCAGGAGTCAAAGGTTGACTCTAAAGTCTGACGTGTACTCGTTCGGTGTGGTGCTTCTTGAGGTATTGTGTGGGCGGCCACCTATAGTTCGTACGTTGGACATGCAGAGGGAAAGCTTGGTGGATTGGGTTCGGAGATGTTATGATAAAGGAGAGATTGATCAAACTGTGGATCCATTTATAAAGGATTCTGTTACGGCTGAGTGCTTGAAATGTTACAGCCAGATGTTCATGAGTTGTTTGCATGATGATGGAAATCAACGGCTCTCAATGAGTGAGGTCGTTGGCGCTTTGGAGTTTGCATTGCAATTGGTGGAGAATGAGGAAGATAACAAGATTCATGTGACCCAAGAAGAGGGAAACACCGAGGAAAAACCGTGGTTGCCGCAGTTTACAAGTGATCATCATGAAGGGAGTACTCATACAGGAACAGGTTCCTTCAGGTATAATCAAATAAATGTGTGA 2493 0.446 MSLCVLLFFLPLLFPLEVNSYVPVENYAVNCGDSNDVTIYNRIWVGDVSTKQYFSIIEPQTGQPSVKAEALNRFPGNPVFPVGSARLSLSKFTYSFVNVTSGPKFLRLHFYPMSYLNFEPYNALFSVIAGNFTLLKDFNASLWVHSDEKTISKEYCLNVETGERLNITFLPSNNHSDAYAFINGIEVVSMPPFLYYTNLSDLDYKFNSFQIQKDKALDTLYRVNVGDNQVPPSNDTGMFRNWDNDYPGYLEKQYPLSVSTGYALQLNYRNNAVPNYTAPADVYLTARSYGMDATENYNVTWTFEVDSQFTYMVRLHFCEFEYWRIKHYGDRAFQIFIAETLAEVYADLIGWGDGFNLVPIHRDYAVVMSTLGDSKKVNLSIKLQQMPDIITKYHDVILNGIEIFKISDQNNNLAGPNPEPILSLSHSAQNPKTTTVIVVVVAVSALMVASVIGIMVFQRRRRTRGHNKEENWWKKKTEEDSSFPSCSGRYFTIGEIRAATNNFADVSIIGVGGFGNVYKGYIDGATPVAIKRLKPDSHQGASEFMNEIELLSQLRHLHLVSLIGYCNDGVEMILVYDFMQRGTLREYLYNSDNQPLSWKKRLEILLGAARGLHYLHTGAQHNIIHRDVKSTNILLDENWVAKLSDLGLSKVGPTGISKTHVTTLVKGSLGYLDPEYFRSQRLTLKSDVYSFGVVLLEVLCGRPPIVRTLDMQRESLVDWVRRCYDKGEIDQTVDPFIKDSVTAECLKCYSQMFMSCLHDDGNQRLSMSEVVGALEFALQLVENEEDNKIHVTQEEGNTEEKPWLPQFTSDHHEGSTHTGTGSFRYNQINV. 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00436 830 FunFam receptor-like protein kinase FERONIA 466 578 - -
Seca2g00436 830 FunFam FERONIA receptor-like kinase 215 407 - -
Seca2g00436 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Seca2g00436 830 SMART serkin_6 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00436 830 ProSiteProfiles Protein kinase domain profile. 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00436 830 FunFam FERONIA receptor-like kinase 26 191 - -
Seca2g00436 830 MobiDBLite consensus disorder prediction 792 821 - -
Seca2g00436 830 Gene3D - 216 407 - -
Seca2g00436 830 Gene3D - 26 190 - -
Seca2g00436 830 FunFam Receptor-like protein kinase FERONIA 579 796 - -
Seca2g00436 830 Gene3D Transferase(Phosphotransferase) domain 1 579 799 - -
Seca2g00436 830 CDD STKc_IRAK 509 775 - -
Seca2g00436 830 Pfam Malectin-like domain 30 406 IPR024788 -
Seca2g00436 830 SUPERFAMILY Protein kinase-like (PK-like) 487 772 IPR011009 -
Seca2g00436 830 PANTHER OS03G0124300 PROTEIN-RELATED 5 476 IPR046957 GO:0004672
Seca2g00436 830 Pfam Protein tyrosine and serine/threonine kinase 508 772 IPR001245 GO:0004672|GO:0006468
Seca2g00436 830 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Seca2g00436 830 Gene3D Phosphorylase Kinase; domain 1 463 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00436 Seca-Chr2 6061741 6064254 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00436 21 787 Receptor kinase-like Gene Family AT3G51550 47.139 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca2g00436 Malectin_like 1.7e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00436 - - mtr:25497555 933.71