Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00435 ATGGCTCGTGGAACCCTAAGTGATCATCTCTACGACACTGATGATGACTCTTCTCTGCCGTGGAAACAGAGGCTCCAGATTTGCATAGGTGCTGCACGGGGACTGCATTATCTCCATACAGGTGCGAAGCACATGATCATTCACCGTGATGTCAAGAGCACCAATATCTTGTTGGATGAGAAGTTATCCAGGATTGGACCCACGGGTATTTCAATGACCCACGTGAGCACGGTTGTGAAGGGCAGCTTTGGATATTTAGATCCAGAGTATTACAAACGACAGCGTTTGACTGAGAAATCTGACGTGTACTCGTTTGGAGTGGTGCTGTTGGAGGTGTTGTGTGCGAGGCAGCCTTTGCTTCGTGAGGCAGAGAAGAAACAGGTGTCACTTGTTGATTGGGCGCGGCGTTGCTATGAAATGGGCACTTTGGCTGAGATTGTGGATCCAGCACTGAATGGTCAGATTGCTCCTCCTGAGTGTTTGAGCAAGTTTGTTGAGATTGCCTTCAACTGTTTGCTTGATGATGGAGCTAAGAGGCCTTCCATGAACGACGTCGTTGGGGTGCTCGAGTTTGTTCTGCAGCTTGAGGAGAATGCTGCTACTACTAAGGGTGTGTTTGTGAGTTAA 627 0.4864 MARGTLSDHLYDTDDDSSLPWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKLSRIGPTGISMTHVSTVVKGSFGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCARQPLLREAEKKQVSLVDWARRCYEMGTLAEIVDPALNGQIAPPECLSKFVEIAFNCLLDDGAKRPSMNDVVGVLEFVLQLEENAATTKGVFVS. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00435 208 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00435 208 SUPERFAMILY Protein kinase-like (PK-like) 1 192 IPR011009 -
Seca2g00435 208 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Seca2g00435 208 PANTHER OS07G0166700 PROTEIN 1 196 IPR045272 GO:0004714|GO:0006468
Seca2g00435 208 Gene3D Transferase(Phosphotransferase) domain 1 1 205 - -
Seca2g00435 208 Pfam Protein tyrosine and serine/threonine kinase 1 187 IPR001245 GO:0004672|GO:0006468
Seca2g00435 208 SMART serkin_6 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00435 208 FunFam Receptor-like protein kinase FERONIA 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00435 Seca-Chr2 6050946 6051599 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00435 1 205 Receptor kinase-like Gene Family AT3G51550 65.116 3.93e-87 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca2g00435 PK_Tyr_Ser-Thr 2.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00435 - - gmx:100305394 316.62