Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00431 ATGAGCCTCTGTGTGCTACTGTTTTTTCTTTCGCTGTTGTTTCCTCTAGAGGTTAACTCATACGTCCCTGTTGATAATTATGCTGTTAACTGTGGTGACTCAAATAATGTTACCATTTATAATCGTTTCTGGGTTGGAGACGTTAGCAGCAAGCAGTACTTTTCTATCATTGAACCACAAACAGGGCAACCATCTGTCAAAGCCGAGGCTCTTAACCGTTTTCCAGGTAACCCAGTATTTCCGGTTGACTCCGCACGAATCTCTCGCTCCGAATTCACATACTCCTTTGTTAATGTCACTAGCGGCCCAAAGTTCCTTCGCCTTCACTTTTATCCAACGTCATATCTTAACTTTGAACCCTACAACGCCCTCTTCTCTATCATAGCAGGAAATCTCACCCTTCTCAAAGACTTCAACGCCTCACTTTGGGTTCACAAAGATGAAGAGACCATAACCAAAGAATATTGTCTCAACGTGGAAACAGGGGAGAGGCTAAACGTAACCTTCCTTCCCAGCACCAACCACTCTGATGCTTATGCTTTTATCAACGGGATTGAGGTTGTGTCTATGCCTCACTTTCTCTATTACACTGATCCCACTGAGTTAGATTATAATGTTAAGCTCGTGGGGGTTCAAAACGACAGAGCTCTTGAGACAATTTACAGAGTCAATGTTGGCGATAATCAGGTTCCACCGAGCAACGATACTGGCATGTTCCGGAATTGGGACAATGATTATCCTGGCTACTTGGAGAAGCAATACCCACAAAGTGTGTCAACTGGCTATGCACTTCAACTCAACTATAGAATTAATGCTGTTCCCAATTACACAGCACCAGCCGATGTGTACTTAACTGCCAGAAGTTACGGGATGGATGCTACCGAGGATTATAATGTAACTTGGAATTTCGAAGTGGATCCACAGTTTAATTATATGGTCAGGTTACATTTCTGCGAGTTTGACCCGCCGATCCAGCATGGAGGCGATAGAGTTTTTCAGATTTTTATAGTTGAGACTTTGGCTGAGGAAAACGCCGATGTGATAAACTGGAGTGGCGGTAACTTAGTTCCTGTTCATAAGGATTATGTTGTGCTCAATCTCAACTCCACCCAAGGAGGAAGTGCTAGGAGTGAGACGGTCAATCTTTCGATTAAGCTGCAACGATTGCCAAAGAACATAATCAGCAAACAACGTGATGTCATACTGAATGGTATTGAGATTTTCAAAATAAGTGATGAGCATAACAATCTCGCCGGACCGAATCCCAAACTCATTCTATCTCCACCCCAACAAGGATCACAAACCCAATCGTCCAAACACGCAAAGACCACTACAATTATCGTTGTGGTGGTTGCAGTTTCAGGCCTCATGCTAGTAGCGTCTGTTATTGGCATCATGGTTTTTCAGCGAAAAAGGATAAGTGGTGATCAAGAGAGGGACGAAAATTCGTGGAAGACAAAGACGGAAGGTTCATCTTTACCATCTCATTTGTGCCGCTACTTTACAATTGCAGAGATCAGAGCTGCCACAAACAACTTCGATGACGTTTTCATCATCGGGGTTGGAGGGTTTGGCCACGTGTATAAAGGTTACATCGATGGAACCACACCCGTTGCGATCAAACGCCTCAAATCAGGTTCTCAACAAGGTGCCAAGGAGTTCATGAACGAGATCGAGATGCTTTCTCAGCTTCGCCATCTTCATTTAGTGTCCCTTATTGGCTACTGCAATGATGGTGTAGAGATGATACTCGTTTACGACTTCATGGCGCGTGGCACTCTCCGCGAGTATCTCTACCATTCTGATAACCAACCCCTTTCGTGGAAGAAGAGGCTTGAGATCTTATTGGGTGCAGCGAGAGGGTTGCATTATCTTCATACAGGTGCGCAGCACAATATCATTCACCGTGACGTGAAGAGCACGAATATCTTGTTGGATGAGAAATGGGTGGCCAAGGTCTCTGATTTTGGGTTATCGAAAGTGGGACCCACAGGGATGTCGACGACCCACGTCAGCACTGTAGTGAAGGGGAGCCTTGGGTATTTGGACCCGGAATACTACAAGCGTCAACGGTTGACTCTTAAGTCTGACGTGTACTCATTCGGTGTGGTGCTTCTTGAAGTGCTGTGCGGGAGGCCTCCTTTTGTTCGTGCGTTGGGCAAGGACGAGGCAAATTTGGTTGATTGGGTTCGGAGGTGTTACGATAAAGGACAGATTGATCAGACGGTGGATCCATTTATAAAGGATTCTGTTACGGCTGAGTGTTTGAAATGTTACAGCCAGATGGCGATGAGTTGCTTGCATGATGATGGGAATCAACGGCCCTCGATGAGTGATGTGGTTGGGGCATTGCAGTTTGCGTTGCATTTGGCTGTGGAGGGTGAAGAAGAAGACAACAACAAGTTGGGTGGGACCCATGAAGATGGAAACAGTAAGGAAAGACTACGGTTACCGCAGTTTATTAATATGAGTGATGAAGGGAGTGATGTGCGATTCACTAGTAGTGATAACACTGGGTCCCAGACCAGCGGCATAACCACAGTCTCAGCCAGTACTGAGGAACAACCTTTGGTTTCTTCTGCTACGGTCTTCTCAGAGATTGGGAACCCAAGAGCACGATAG 2622 0.4554 MSLCVLLFFLSLLFPLEVNSYVPVDNYAVNCGDSNNVTIYNRFWVGDVSSKQYFSIIEPQTGQPSVKAEALNRFPGNPVFPVDSARISRSEFTYSFVNVTSGPKFLRLHFYPTSYLNFEPYNALFSIIAGNLTLLKDFNASLWVHKDEETITKEYCLNVETGERLNVTFLPSTNHSDAYAFINGIEVVSMPHFLYYTDPTELDYNVKLVGVQNDRALETIYRVNVGDNQVPPSNDTGMFRNWDNDYPGYLEKQYPQSVSTGYALQLNYRINAVPNYTAPADVYLTARSYGMDATEDYNVTWNFEVDPQFNYMVRLHFCEFDPPIQHGGDRVFQIFIVETLAEENADVINWSGGNLVPVHKDYVVLNLNSTQGGSARSETVNLSIKLQRLPKNIISKQRDVILNGIEIFKISDEHNNLAGPNPKLILSPPQQGSQTQSSKHAKTTTIIVVVVAVSGLMLVASVIGIMVFQRKRISGDQERDENSWKTKTEGSSLPSHLCRYFTIAEIRAATNNFDDVFIIGVGGFGHVYKGYIDGTTPVAIKRLKSGSQQGAKEFMNEIEMLSQLRHLHLVSLIGYCNDGVEMILVYDFMARGTLREYLYHSDNQPLSWKKRLEILLGAARGLHYLHTGAQHNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGMSTTHVSTVVKGSLGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCGRPPFVRALGKDEANLVDWVRRCYDKGQIDQTVDPFIKDSVTAECLKCYSQMAMSCLHDDGNQRPSMSDVVGALQFALHLAVEGEEEDNNKLGGTHEDGNSKERLRLPQFINMSDEGSDVRFTSSDNTGSQTSGITTVSASTEEQPLVSSATVFSEIGNPRAR. 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00431 873 FunFam FERONIA receptor-like kinase 215 411 - -
Seca2g00431 873 MobiDBLite consensus disorder prediction 826 859 - -
Seca2g00431 873 CDD STKc_IRAK 519 781 - -
Seca2g00431 873 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Seca2g00431 873 MobiDBLite consensus disorder prediction 796 814 - -
Seca2g00431 873 FunFam Receptor-like protein kinase FERONIA 589 805 - -
Seca2g00431 873 Pfam Protein tyrosine and serine/threonine kinase 519 783 IPR001245 GO:0004672|GO:0006468
Seca2g00431 873 Pfam Malectin-like domain 30 410 IPR024788 -
Seca2g00431 873 ProSiteProfiles Protein kinase domain profile. 513 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00431 873 Gene3D Transferase(Phosphotransferase) domain 1 589 806 - -
Seca2g00431 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Seca2g00431 873 FunFam FERONIA receptor-like kinase 26 191 - -
Seca2g00431 873 SUPERFAMILY Protein kinase-like (PK-like) 490 786 IPR011009 -
Seca2g00431 873 MobiDBLite consensus disorder prediction 796 859 - -
Seca2g00431 873 Gene3D Phosphorylase Kinase; domain 1 474 588 - -
Seca2g00431 873 PANTHER OS03G0124300 PROTEIN-RELATED 4 486 IPR046957 GO:0004672
Seca2g00431 873 Gene3D - 26 190 - -
Seca2g00431 873 Gene3D - 215 411 - -
Seca2g00431 873 SMART serkin_6 513 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00431 873 FunFam Receptor-like protein kinase FERONIA 485 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00431 Seca-Chr2 6035177 6037822 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00431 21 873 Receptor kinase-like Gene Family AT3G51550 46.377 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca2g00431 Malectin_like 1.3e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00431 - - mtr:25497555 984.941