Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00427 ATGGAGAATTATTTGTGCAGAAAGAACAAAGTTCCCAGTGTGACCATCCTCTCCGTTCTTTTGTTTCTCCTTCAGCTATTATTGTTACCCAGTGATGTTAACTCATACGATCCTGCTGACAATTTTGCCGTCAACTGCGGCTACTCCGGAAACGTTAACTTTCATAATCGGAACTGGATTGGCGATGTTAACGTTGACCCCAAACTTCACTTTTCTACCATTGAAACTGGACAACCATCTCTCAAATCCAACGCTCCTAATTCTCCTTCAGTTCTCCAAGTTCCATTTGGAACCGCACGTCTCTCTCGATCCAAATTCACATACTCCTTTTCTGTCACTAACGGCCCAAAGCTCCTTCGCCTTCACTTTTATCCAACGTCATATCTTAACTTTGAACCCTACAACGCCTTCTTCTCTATCATAGCACAAAATCTCACCCTTCTCAAAGACTTCAACGCCTCACTTTGGGTTCACAAAGATGAAGAGACCATAACCAAAGAATATTGTCTCAACGTGGAAACAGGGGAGAGGCTAAACGTAACCTTCCTTCCCAGCACCAACCACTCTGATGCTTATGCTTTTATCAACGGGATTGAGGTTGTGTCTATGCCTCACTTTCTCTATTACACTGATCCCACTGAGTTAGATTATAATGTTAAGCTCAACGACAGAGCTCTTGAGACAATTTACAGAGTCAATGTTGGCGATAATCAGGTTCCACCGAGCGACGATACTGGCATGTTCCGGAATTGGGATAATGATTATCCACGCTACTTGGAGAAGCAATATCCACAAAGTGTACAAACTGGCTATAATCTTCATGATCGCCTCAACTATAGAAATAATGCTGTTCCCAATTACACAGCACCAGCCGATGTGTACTTAACTGCCAGAAGTTACGGGAAGGATGCCACCGAGGATTATAATGTAACTTGGAATTTCGAAGTGGATTCACAGTTTAATTATATGGTCAGGTTACATTTCTGCGAGTTTGACCCGCTGATCCAGCATGGAGGCGATAGAGTTTTTCAGATTTTTATAGCTGAGACTTTGGCAGAGCAAAACGCCGATGTGATAAGTTGGAGTGGCAGTAACTTGGTTCCTGTTCATAAAGATTATGCTGTGTTTATGTCCACCCAAGGAAGCTCTAAGAAAGTTAATCTTTCCATCAAGCTGCAACGATTGCCAAAGAGCATGACCACTAAATACCGTGATGTCATATTGAATGGGATCGAGATTTTCAAAATTAGTGATGACAATAACAATCTCGCTGGTCCGAATCCCGAACCTATTCTTCTATCTCCACCCCAACAAGCATCATCCAAAAACTCAAAGACCACTACAGTTATCGTTGCCGTGGTTGCAGTTTCAGTTTCAGGACTCATACTAGCATCTGTCATTGGCATCATCATAGTTTTGCGGCGAAGGAGAAAAGGTCAACGCAGGTCTGTTATTTACTTATTGTGTATTTGGTTCCGGAAAATGGCTAGAACAGAGGTGGAGGTGGGTTCTGAAGAGATAAGCAATAAAAGTATATCAGTATCGTCTTCAAATTTGTGCCGTTACTTCTCAATCATTGAGATAAGAGCAGCAACAATAAACTTTGATGACATTTTCGTTGTTGGCGTTGGAGGTTTTGGGAAAGTGTATAAAGGTTACATTGATGATGGTACCATACCAGTGGCAATCAAACGTTTCATTCCAAATTGTGGACAAGGAGTTCAAGAGTTCAAAACAGAGGTTGAGATGCTTTCTCAGCTTAGCCATCCTCATTTGGTCTCTCTGATTGGTTTCTGTAACGATGAAGATGACATGATAATTGTCTATGATTTCATGGCCAATGGGACCCTCCGTGACCATCTACATGGTTCATCAGCAAAAGCCCCTCTTTCGTGGAAGCAACGGCTTGAGATTTGCATTGGGGCAGGGCTTGGATTACAGTATCTCCATAATGGTGCCAAGTATAGTATTATTCACCGTGATGTGAAAAGTTCCAACATTTTGTTGGATGAGAAATGGGTGGCTAAGATTTCGGATTTTGGGTTGTGTAAATTTGGACCAAATGGGATTTCTAAGTTCCATGTAACCACACAAGTGAAAGGTAGCCTTGGATATTTAGACCCTGAATACTCCAAGACAAAGTGGTTGACCCACAAGTCTGATGTGTACTCTTTTGGTGTGGTGTTGCTTGAAGTCTTGTGTGGGAGGCCACCTTTGTTGCGTAAAGTGAAAGGGCAAGAGAGAATCTTGGTGGAGTGGGCCCGAACATGCCATAGTGAGGGACCTCAAGCCATAGACCAAATGGTTGATCCATTTCTGAGAGGAAAAATAGTGCCAAAGTGTTTAGATAAGTTCATTGAGGTGGCAATGAATTGTGTTGTTTATGATGGAAATGAACGGCCATCAATGAGTGATGTGGTAGAGGGGCTTGAGCTTGCTTTGCAGCTACAACAGAGCATAGAAGAAGAAGATCCAAGGTTCAGCAGAATGAAAGATTGA 2499 0.4238 MENYLCRKNKVPSVTILSVLLFLLQLLLLPSDVNSYDPADNFAVNCGYSGNVNFHNRNWIGDVNVDPKLHFSTIETGQPSLKSNAPNSPSVLQVPFGTARLSRSKFTYSFSVTNGPKLLRLHFYPTSYLNFEPYNAFFSIIAQNLTLLKDFNASLWVHKDEETITKEYCLNVETGERLNVTFLPSTNHSDAYAFINGIEVVSMPHFLYYTDPTELDYNVKLNDRALETIYRVNVGDNQVPPSDDTGMFRNWDNDYPRYLEKQYPQSVQTGYNLHDRLNYRNNAVPNYTAPADVYLTARSYGKDATEDYNVTWNFEVDSQFNYMVRLHFCEFDPLIQHGGDRVFQIFIAETLAEQNADVISWSGSNLVPVHKDYAVFMSTQGSSKKVNLSIKLQRLPKSMTTKYRDVILNGIEIFKISDDNNNLAGPNPEPILLSPPQQASSKNSKTTTVIVAVVAVSVSGLILASVIGIIIVLRRRRKGQRRSVIYLLCIWFRKMARTEVEVGSEEISNKSISVSSSNLCRYFSIIEIRAATINFDDIFVVGVGGFGKVYKGYIDDGTIPVAIKRFIPNCGQGVQEFKTEVEMLSQLSHPHLVSLIGFCNDEDDMIIVYDFMANGTLRDHLHGSSAKAPLSWKQRLEICIGAGLGLQYLHNGAKYSIIHRDVKSSNILLDEKWVAKISDFGLCKFGPNGISKFHVTTQVKGSLGYLDPEYSKTKWLTHKSDVYSFGVVLLEVLCGRPPLLRKVKGQERILVEWARTCHSEGPQAIDQMVDPFLRGKIVPKCLDKFIEVAMNCVVYDGNERPSMSDVVEGLELALQLQQSIEEEDPRFSRMKD. 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00427 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Seca2g00427 832 PANTHER OS03G0124300 PROTEIN-RELATED 15 479 IPR046957 GO:0004672
Seca2g00427 832 SUPERFAMILY Protein kinase-like (PK-like) 511 817 IPR011009 -
Seca2g00427 832 FunFam Receptor-like protein kinase FERONIA 612 831 - -
Seca2g00427 832 FunFam receptor-like protein kinase FERONIA 498 611 - -
Seca2g00427 832 Gene3D Transferase(Phosphotransferase) domain 1 612 829 - -
Seca2g00427 832 FunFam FERONIA receptor-like kinase 41 204 - -
Seca2g00427 832 ProSitePatterns Protein kinases ATP-binding region signature. 541 564 IPR017441 GO:0005524
Seca2g00427 832 ProSiteProfiles Protein kinase domain profile. 535 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00427 832 Gene3D - 41 203 - -
Seca2g00427 832 Gene3D - 224 418 - -
Seca2g00427 832 Gene3D Phosphorylase Kinase; domain 1 495 611 - -
Seca2g00427 832 Pfam Protein tyrosine and serine/threonine kinase 541 809 IPR001245 GO:0004672|GO:0006468
Seca2g00427 832 SMART serkin_6 535 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00427 832 CDD STKc_IRAK 550 811 - -
Seca2g00427 832 Pfam Malectin-like domain 44 416 IPR024788 -
Seca2g00427 832 FunFam FERONIA receptor-like kinase 224 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00427 Seca-Chr2 5962653 5971740 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00427 36 822 Receptor kinase-like Gene Family AT3G51550 45.725 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca2g00427 Malectin_like 3e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00427 - - mtr:25497555 831.632