Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00419 ATGGGAATGATTCTTCCCAAATATTTAGGCTTGTGTAGTTCAAAGCATAAAAATTCATCTTCCACACACTCTTCAACACTAATAGAAGATTTATGCCATCAATTTTCCCTGGCCGATCTAACGAAATCAACCAACAACTTTGATGAAAGCCAAATAGTAGGAGGAGCATTTGGTGAAATATACAAAGGTTGTCTCAAACATCACAATGGTGCAACTAATTATACAATAGGAATGAAACGGGTTAAAGCGAAATCCAGCAAAGAGATCCTTGAATTAAAGAACGAAATTGAGTTGCTCTGTCAGCTTCGTCACCCAAATTTGATATCTCTTATAGGATTTTGTGACCACAAAGATGAGATGATTGTTGTGTATGAGTACATGCTCAATGGCAGTCTTTATGATCACCTATATTGTAGTGATACGAAAATAAAACCACTCACATGGAAGCAAAGGCTAAAGATTTGCATGGGAGCAGCATGTGGACTACACTACCTTCACACAGGAGCCAAGCGCACCATTTTTCACCGTGACATAAAACCCCATGACATTCTTTTGGATAACAATATGTTGCCAAAGCTCGGAGATTTCAGAATTTCCTTGCAAGGTCCTCGTTTTATGTCGAAGCCAAAACCAATTGAAGTAAAATCTGTTTTAGGTACTTATGGTTATATGGCTCCCGAGTATGTCATGAACAAGACCTTCACAGATAAATGTGATGTTTACTCATTTGGTATGGTTCTGCTAGAAGTGGTATGCGCAAAGGACAAACAAACAATTTTTAATAAGATGACCAAGTTAAACCATGATTTGGAACCTGTTGAAAGAGAAGATTTAGAAAGGTTCAGTGCTTGCAGTGTAGCTATAGTGCTTATACGTTCCTTTGTGGAAAGGTATCCAGTTGAGGAGATTATAGAACCAATTCTTATGGGAAAGATTGCGCCAGAATGTTGGGAAGTATTCATGGATATCATCGTAAGATGCTTGAAGTTTGATCCAAATGAGAGACCAATAATGGGTGAGGTGGAGGTGCAACTAGAGCATGCTCTGTCATTGCAGGAAGAAGAAGATATCAGAAAGACTTGCGATGGTTATACCTTACTATCTACCACCATTATTAACTCTCAGACTCAGAGGAAGCGCAATCCAACAATAATAGAAGAGCTATGCCCTCAATTTTCTCTGGCCGATCTGAGGAAATCAACCAACAACTTCGATGAGAGTCAAATAATAGGAAGAGGATACTTTAGTATAGTATATAAAGGTCGTCTCCAATACAATAGTACAGATTATACAGTTGCAGTGAAGCGAATTAAGGATTCTAAAAAAGGATTGGAAGAGTTCAAGAATGAAATTGAGTTGCTCTGCCAGCTTCGTAACCCTAATTTGGTCACTCTCATAGGATTTTGCAACCACAAAGATGAGAAGATTCTCGTGTATGATTACCTCCCTAATGGATCTCTCCGCGATCATCTATTCAATAGGGAGAAGGAATTACCACTGTCATGGAAGAAAAGGTTAGAGATCTGCATAGGAGCAGCACGCGGAGTGCACTACCTCCACACAGGAGCCAGACGCACCATCTTTCACCTTGACATCAATTTGGGAAACATTGTTTTGGATAGCAATATGGTACCCAAACTCACAGATTTCTGGTTTTCCTTACAGGGACCTCTATGTACATCTGGTTACATGGCCCCCGAGTATGCTTTATATGGCACGGTGACAGATAAATGTGACGTTTATTCATTTGGTGTGGTTCTATTAGAAGTGATTATGCGAAGACAGCTCATAGCTCATAGCTATATTGATGCGCCTCTAGCAGGGAAAATTGCAGCAGAGTGTTGGGAAGTATACATAGATATCATAGACGGTTGCTTGAAGGATGAACCAAATGATCGACCAACGATGGGTGAAGTGGAGGTGGAACTTGAGCGTGCTCTTACTTTGCAACTGGAGGCTGATGCCAGGAATACTACTGCTGCTGATTATTATAGCTTATTAGCCAACAGCACTACTCAAACTCACAAAGAAGGGTTCAAGAAGGAAATTGAGTTGCTCTGCCAGCTTCATCACCCTAATTTGATCTCTCTCAAAGGATTCTGCAACCACAAAAATGAGAAGATTATTGTGTATGAGTACATGCCCAATGGATCTCTGCATGATCACCTACACAATAAGGACATGGAACCACTGTCATGGAAGAAAAGGCTAGAGATTTGTATAGGAGTAGCACGTGGGGTGCACTATCTCCACACAGGAGCCAGACGCACCATCATTCACCGGCTTCGAGCTGAGGAGATTATTGATCCGACTCTCACAGGAAAAATTGCACTAGAATGTTGGGAAGTATTCATAGATATCATAGACGGCTGCTTGAATGAAGAACCAAATGAACGACCAACAATGGGTGAAGTGGAGGTGGAACTTGAGCGTGCCCTTACTTTGCAATTGGAAGCAGACGCCAGGAATACTGGTGGCGATCATTATAGCTTATCATCCACCAAGAGGCGCAAATTGCAGTCTAAAATAAATTAA 2535 0.4083 MGMILPKYLGLCSSKHKNSSSTHSSTLIEDLCHQFSLADLTKSTNNFDESQIVGGAFGEIYKGCLKHHNGATNYTIGMKRVKAKSSKEILELKNEIELLCQLRHPNLISLIGFCDHKDEMIVVYEYMLNGSLYDHLYCSDTKIKPLTWKQRLKICMGAACGLHYLHTGAKRTIFHRDIKPHDILLDNNMLPKLGDFRISLQGPRFMSKPKPIEVKSVLGTYGYMAPEYVMNKTFTDKCDVYSFGMVLLEVVCAKDKQTIFNKMTKLNHDLEPVEREDLERFSACSVAIVLIRSFVERYPVEEIIEPILMGKIAPECWEVFMDIIVRCLKFDPNERPIMGEVEVQLEHALSLQEEEDIRKTCDGYTLLSTTIINSQTQRKRNPTIIEELCPQFSLADLRKSTNNFDESQIIGRGYFSIVYKGRLQYNSTDYTVAVKRIKDSKKGLEEFKNEIELLCQLRNPNLVTLIGFCNHKDEKILVYDYLPNGSLRDHLFNREKELPLSWKKRLEICIGAARGVHYLHTGARRTIFHLDINLGNIVLDSNMVPKLTDFWFSLQGPLCTSGYMAPEYALYGTVTDKCDVYSFGVVLLEVIMRRQLIAHSYIDAPLAGKIAAECWEVYIDIIDGCLKDEPNDRPTMGEVEVELERALTLQLEADARNTTAADYYSLLANSTTQTHKEGFKKEIELLCQLHHPNLISLKGFCNHKNEKIIVYEYMPNGSLHDHLHNKDMEPLSWKKRLEICIGVARGVHYLHTGARRTIIHRLRAEEIIDPTLTGKIALECWEVFIDIIDGCLNEEPNERPTMGEVEVELERALTLQLEADARNTGGDHYSLSSTKRRKLQSKIN. 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00419 844 ProSitePatterns Protein kinases ATP-binding region signature. 410 435 IPR017441 GO:0005524
Seca2g00419 844 Gene3D Phosphorylase Kinase; domain 1 368 481 - -
Seca2g00419 844 Gene3D Phosphorylase Kinase; domain 1 9 126 - -
Seca2g00419 844 SUPERFAMILY Protein kinase-like (PK-like) 380 642 IPR011009 -
Seca2g00419 844 Pfam Protein tyrosine and serine/threonine kinase 51 344 IPR001245 GO:0004672|GO:0006468
Seca2g00419 844 Pfam Protein tyrosine and serine/threonine kinase 407 641 IPR001245 GO:0004672|GO:0006468
Seca2g00419 844 Pfam Protein tyrosine and serine/threonine kinase 667 762 IPR001245 GO:0004672|GO:0006468
Seca2g00419 844 Gene3D Transferase(Phosphotransferase) domain 1 665 763 - -
Seca2g00419 844 SUPERFAMILY Protein kinase-like (PK-like) 672 811 IPR011009 -
Seca2g00419 844 ProSiteProfiles Protein kinase domain profile. 645 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00419 844 FunFam Receptor-like protein kinase ANXUR2 12 126 - -
Seca2g00419 844 SUPERFAMILY Protein kinase-like (PK-like) 18 341 IPR011009 -
Seca2g00419 844 ProSiteProfiles Protein kinase domain profile. 404 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00419 844 Gene3D Transferase(Phosphotransferase) domain 1 764 829 - -
Seca2g00419 844 Gene3D Transferase(Phosphotransferase) domain 1 482 664 - -
Seca2g00419 844 Gene3D Transferase(Phosphotransferase) domain 1 127 367 - -
Seca2g00419 844 FunFam Receptor-like protein kinase ANXUR2 369 481 - -
Seca2g00419 844 ProSiteProfiles Protein kinase domain profile. 46 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00419 844 MobiDBLite consensus disorder prediction 824 844 - -
Seca2g00419 844 PANTHER OS07G0166700 PROTEIN 764 816 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00419 Seca-Chr2 5860344 5868909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00419 765 825 Receptor kinase-like Gene Family AT3G51550 40.984 1.57e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca2g00419 PK_Tyr_Ser-Thr 1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00419 - - adu:107486597 638.647