Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00417 ATGTTGTTCGGTTTCGGTTTAACTTCAGATGCTTATGATTCACTTGACCCAAACGAGAACATCACAATCAAATGGGATATTATAAGTTGGACTCCTGATGGTTATGTTCCTATTGTTACAATGAACAACTTCCAAAAATGTTGTCCTATTGCTTCACCTGGTTGGTCACTAGGATGGACATGGGCAAAAAAGGAGGTGATATGGAACATGATGGGAGGGATGACCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAATATTCCACATAACTGTAAAAAGGATCCAACTGTTGTAGATTTACTTCCTGGAACGCATTACAACATGCAAGTTGCACATTGTTGCAAAGCTGGGGTGCTTAGCTCATGGCTACAAGATCCAACTAATGCAGTAGCATCATTTCAAGTCACTGTTGGTGAAGCTGGAACCACGGACAGAACTATCAATCTCCCCAAAAACTTCACCTCGAAAACACCAGGACCAGGTTATACTTGTGGGCCAACAAAAATTGTGAAACCCACAAAATTCATTCAACCAGACAAAAGGGGAGTAACCCAAGCACTCATGACATGGAAAGTGACATGCACATATTCACAATTTCTAGCTTACAAAACTCCCACTTGTTGTGTCTCTCTCTCCTCTTTTTATAATGATACCATTGTACCCTGCCCAACATGCTCATGTGGCTGCCAGAGTAACTCATCTCAGTCAAGGAGTTGTGTAGATGCAAATACTCCATATTTGTCACCAGTTGTTTCTGGCTCCGGAAAGAATAAATTTGCACCTTTGGTTCAATGTACTAATCATATGTGCCCAGTCCAAATCCATTGGCATGTTAAGCATAACTACAAGGAATACTGGCGTGTGAAGGTTTCTATTACTAATTTGAATTACCATATGAATTATTCTGAGTGGAACTTGGCTATTCAACATCCAAACTTCAACAATCTGATTCAACTGTTCGGTTTCAACTACAAGTCATTAATGACTCATCACACTTCAATAAATGACTCAGCAATGCTTTATGGAATAAAGTTTTATAATGATATTCTCAACCAACCTGGCCCTAATGGTAATGTTGAAACAGAGTTACTCTTTCAAAAGGATAAAGCAACTTTTACTTTTGATAAGGGTTGGGTTTTTCCTCGGAGGATCTACTTCAATGATACTTATGATCCATTTGACCCAAATGGGAACATCACAATCCAATGGGATATCATAAGTTGGACTCCTTATAGTTATGTTGCTATTGTTACAATGAACAACTTTCAAAAATACTGTCATATTGCTTCACCTGGCTGGTCACTAGGATGGACATGGGCAAAACAGGAGGTGATATGGAACATGATGGGAGGGATGACCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAATATTCCACATAGTTGTAAAAAGGATCCAACTGTTGTAGATTTACTTCCTGGAACACCTTATAATCAGCGAGTTCCAAATTGCTGCAAAGGCGGGATACTTAGTTCATGGTTGCAGGATCCAACCAATGCAGTAGCATCATTTCAAGTTAATGTTGTTGGAGCTGGAACCACAGACAAAACTATCAAAGTCCCGAAAAACTTCACCTTGAAAGCATCAGGACCGGGTTACACTTGTGGGCCAGCAAAAATTGTGAGACCCACTAAATTCATTACACAAGACAAAAGGAGAGTGACCCAAGCACTCATGACATGGAATGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCCACTTGTTGTCTCTCTCTCTCTCCTCTTTCTATAATGATACTATTGTACCCTGCCCAACATGTACATGTGGCTGCCAGAGTAACTCATCTAAGTCAGTTTCTGGATTTGAAAAGAATAAATTTTCACCTTTGGTTCAATGTACTAGTCATATGTGCCCAATCCAAATTAATTGGCGTGTTAAGCTCAACTACAAGGAGTACTGGCGTGTGA 1965 0.3969 MLFGFGLTSDAYDSLDPNENITIKWDIISWTPDGYVPIVTMNNFQKCCPIASPGWSLGWTWAKKEVIWNMMGGMTTEQGDCSKFKGNIPHNCKKDPTVVDLLPGTHYNMQVAHCCKAGVLSSWLQDPTNAVASFQVTVGEAGTTDRTINLPKNFTSKTPGPGYTCGPTKIVKPTKFIQPDKRGVTQALMTWKVTCTYSQFLAYKTPTCCVSLSSFYNDTIVPCPTCSCGCQSNSSQSRSCVDANTPYLSPVVSGSGKNKFAPLVQCTNHMCPVQIHWHVKHNYKEYWRVKVSITNLNYHMNYSEWNLAIQHPNFNNLIQLFGFNYKSLMTHHTSINDSAMLYGIKFYNDILNQPGPNGNVETELLFQKDKATFTFDKGWVFPRRIYFNDTYDPFDPNGNITIQWDIISWTPYSYVAIVTMNNFQKYCHIASPGWSLGWTWAKQEVIWNMMGGMTTEQGDCSKFKGNIPHSCKKDPTVVDLLPGTPYNQRVPNCCKGGILSSWLQDPTNAVASFQVNVVGAGTTDKTIKVPKNFTLKASGPGYTCGPAKIVRPTKFITQDKRRVTQALMTWNVTCTYSQFLAQKTPTCCLSLSPLSIMILLYPAQHVHVAARVTHLSQFLDLKRINFHLWFNVLVICAQSKLIGVLSSTTRSTGV. 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00417 654 PANTHER PROTEIN COBRA 8 389 IPR006918 GO:0010215|GO:0016020
Seca2g00417 654 Pfam COBRA-like protein 35 198 IPR006918 GO:0010215|GO:0016020
Seca2g00417 654 Pfam COBRA-like protein 414 577 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00417 Seca-Chr2 5833073 5845955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00417 388 592 COBRA Gene Family AT3G02210 73.659 1.35e-107 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00417 - - gmx:100783820 660.603