Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00416 ATGGTAACGTGCAAATTTTATAGGATAACACTTTGCTTATATACCTTTCTTAAGCAGAGGAGCCAACTGGAACACCAACAAGACAATGCTTATGATCCACTTGACCCAAACGGAAATATCACAATCAAATGGGATATTATAAGTTGGACCCCTGATGGTTATGTTGCTGTCGTCACAATGAACAACTTCCAACAATATCGTCACATTGCTTCACCTGGCTGGACACTAGGATGGACATGGGCAAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAATGTTCCACATTGCTGTAAAAAGGACCCAACAGTTGTAGATTTACTTCCTGGAACTCCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGGGTGCTCAGCTCATGGGTGCAGGATCCAACCAATGCAGCATCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACCACAAACAAAACTGTCAGAGTCCCCAAAAACTTCACCTTGAAAGCACCAGGTCCGGGTTATACTTGTGGGCCAGCAAAAATTGTGAAACCCACTCAATTCATTCAACCAGACAAAAGAAGAGTGACCCAAGCACTCATGACATGGAATGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCCACCTGCTGTGTCTCTCTCTCCTCTTTCTATAATGATACCATTGTACCCTGCCCAACATGTGCATGTGGCTGCCAGAGTAACTCATCTCAGTCAGGGAGCTGTTTAAATGCAGATACGCCACATCTGGCATCAGTTGTTTCTGGCCTTGGAAAGAATAATTTGGCACCTTTGGTTCAATGTACTAGTCATATGTGCCCTATCCGAATCCACTGGCATGTTAAGCTTAACTACAAGGAGTATTGGCGTGTGAAGGTTACTATTACTAATTTTAATTTCCGTATGAATTATTCTGAGTGGAACTTGGTTGTTCAACACCCAAACTTCGACAATCTGACTCAGCTATTCAGTTTCAACTACAAGTCATTAACTCCTTACGGTTCAATAAATGACACAGCAATGCTTTGGGGAGTCAAGTTCTATAATGATTTTCTCAACCAAGCTGGCCCTAATGGTAATGTTCAATCAGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTTTGATAAGGGCTGGGCTTTTCCTCGGAGGATCTACTTCAATGGTGACAACTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCAAGGCAAGAGGTTTCCTTGTTTGCTTTAGTGATGACCTCTTTGGTAGCCTTGTTATTTTATGCATATGCATAA 1350 0.4215 MVTCKFYRITLCLYTFLKQRSQLEHQQDNAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWVQDPTNAASSFQVSVGRAGTTNKTVRVPKNFTLKAPGPGYTCGPAKIVKPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQSNSSQSGSCLNADTPHLASVVSGLGKNNLAPLVQCTSHMCPIRIHWHVKLNYKEYWRVKVTITNFNFRMNYSEWNLVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALVMTSLVALLFYAYA. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00416 449 Pfam COBRA-like protein 54 217 IPR006918 GO:0010215|GO:0016020
Seca2g00416 449 PIRSF COBRA 2 449 IPR006918 GO:0010215|GO:0016020
Seca2g00416 449 PANTHER PROTEIN COBRA 24 439 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00416 Seca-Chr2 5816636 5820995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00416 6 444 COBRA Gene Family AT3G02210 75.057 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00416 - - gmx:100783820 837.795