Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00415 ATGAGGCTTGTCATATCAGTTCTCTGTGCTATTGTGCTATTTTCATATGCAGCTGCATATGATCCTTTAGATCCCAATGGAAACATAACAATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTACCGGCACATCATGAATCCTGGATGGACCTTGGGATGGTCATGGGCTAAGAAAGAAGTTATATGGTCCATGGTAGGAGCTCAAACCACAGAGCAAGGAGACTGTTCTAAGTTCAAAGGCAATGTGCCTCATTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTACCTTACAATCAGCAATTCTCAAACTGCTGTAAAGGTGGAGTGGTGGCAGCATGGGGCCAAGATCCTTCATCAGCTGTCTCATCCTTCCAAGTGAGTGTTGGACAAGGTGGTACTTCAAACAAGACAGTTAAACTCCCCAAAAACTTCACTCTCCTGGCTCCAGGACCAGGCTACACTTGTGGTCCTGCCAAGGTTGTTCCTTCCACTGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTTATGACATGGAATGTTACCTGCACATACTCACAATTTCTGGCAAGAAAGAACCCAAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAGACCATTACCCCTTGTCCCACTTGTGCCTGTGGCTGCCAGAACAAGAAGAATTATGTTGGTATGGTATGCAGGAGTGACTCCAAATTTCTCAGCACAGTGGGGATCCACACTCCAAAGAAAGAAAATGAACAACTACTACAGTGTACTCATCACATGTGCCCCATCAGGGTACACTGGCATGTGAAGCTCAACTATAAGGACTATTGGCGAGTCAAGATTGCCGTGACAAATTTCAATTACAAGATGAATTACTCTCTCTGGACTCTGGCAGTTCAGCATCCAAATCTTAACAATGTCACCGAAGTTTTCAGCTTTGATTACAAGCCTTTGGTTCCCTATGAGTCCGTGAATGACACTGGTATGTTCTATGGCATGAAATACTTCAATGATCTCTTAATGGAAGCTGGACCAAGTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGGACAAAGATACATTCACATTCAAGCAAGGATGGGCATTTCCTCGCAAGGTTTACTTTAATGGTGAAGAATGCTTGATGCCTCCACCAGATACCTATCCAATCCTCCCAAATTCTGCCCCTGTAAACCTACATAACTTCCCAGTATTCATCTTCTCAATGCTTGTCTTTCTAGCTATTTGGTGA 1308 0.4411 MRLVISVLCAIVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMYRHIMNPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAVSSFQVSVGQGGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPTCACGCQNKKNYVGMVCRSDSKFLSTVGIHTPKKENEQLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAVTNFNYKMNYSLWTLAVQHPNLNNVTEVFSFDYKPLVPYESVNDTGMFYGMKYFNDLLMEAGPSGNVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGEECLMPPPDTYPILPNSAPVNLHNFPVFIFSMLVFLAIW. 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00415 435 PANTHER PROTEIN COBRA 7 428 IPR006918 GO:0010215|GO:0016020
Seca2g00415 435 PIRSF COBRA 1 435 IPR006918 GO:0010215|GO:0016020
Seca2g00415 435 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00415 Seca-Chr2 5813954 5816849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00415 19 434 COBRA Gene Family AT3G29810 66.827 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00415 - - gmx:100784352 853.973