Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00413 ATGGCATCCCCAACACCATTGTTGAAAGATGAGCTTGACATCGTCATCCCCACCATAAGAAACCTTGATTTCTTGGAGATGTGGAGGCCTTTCTTTCAGCCTTACCATCTCATCATTGTCCAAGATGGTGACCCTTCAAAGACCATCAAGGTCCCTGAAGGCTTTGACTATGAGCTCTACAACCGCAATGACATCAACAGGATTCTAGGTCCAAAAGCCAATTGCATCTCCTTCAAGGACTCTGCATGCCGCTGCTTTGGCTATATGGTCTCTAAGAAGAAGTACATCTACACCATTGATGATGACTGCTTTGTTGCCAATGAACCATCTGGGAAAAAGATTAATGCACTTGAGCAGCATATAAAAAACCTTCTCTGTCCATCCACACCCTTCTTCTTCAATACCCTCTATGATCCTTACAGAGATGGTGCAGACTTTGTTCGTGGGTACCCCTTCAGTCTCCGTGAAGGTGTACCAACTGCAGTTTCTCATGGTCTTTGGCTCAACATCCCTGACTATGATGCTCCAACTCAGCTTGTGAAGCCTCTTGAGAGGAACACTAGGTATGTGGATGCTGTTCTTACCATACCAAAAGGGACTTTATTTCCCATGTGTGGAATGAACTTGGCATTTGATCGTGAGCTGATAGGACCAGCAATGTACTTTGGTCTTATGGGTGATGGTCAGCCTATTGGACGCTACGACGACATGTGGGCTGGCTGGTGCTGCAAGGTAATCTGTGATCACTTGGGATTGGGAATCAAGACTGGTCTTCCTTATATCTATCACAGCAAGGCCAGTAACCCATTTGTTAACCTGAGGAAAGAGTACAAAGGCATATTCTGGCAAGAAGACATTATCCCATTCTTCCAGAGCATTGTTCTTCCAAAAGAAGCCACCAGTGTTCAGAAGTGCTACATTGAGCTTGCCAAACAAGTCAAGGATAAACTTAGCAAGGTAGATCCATACTTTGACAAGTTGGCAGATGCCATGGTCACTTGGATTGAAGCTTGGGATGAGCTTAACCCTGCCGGAGCATCATTGGCCAATGGAAAAGCATAG 1062 0.4529 MASPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKANCISFKDSACRCFGYMVSKKKYIYTIDDDCFVANEPSGKKINALEQHIKNLLCPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCCKVICDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSIVLPKEATSVQKCYIELAKQVKDKLSKVDPYFDKLADAMVTWIEAWDELNPAGASLANGKA. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00413 353 PIRSF UPTG 2 346 IPR004901 GO:0016866|GO:0071669
Seca2g00413 353 SUPERFAMILY Nucleotide-diphospho-sugar transferases 32 242 IPR029044 -
Seca2g00413 353 PANTHER UDP-ARABINOSE MUTASE 3 344 IPR037595 -
Seca2g00413 353 Pfam Reversibly glycosylated polypeptide 8 342 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00413 Seca-Chr2 5792867 5795484 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00413 K13379 - gmx:100784882 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00413 2 5792867 5795484 Seca2g00413 2 5792867 5795484 ECH