Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00375 ATGAGTAATTTATCTGAACATAAGGAAGATGAGAATGATGGAAATGAAAATGAGGGAAGCGAAAATGAATTGAGTGAACACATTTGTATTGATAACTTCCAGGACATTGTTAAAAACAATCTTGTATCTAAAAGTCCTGAGCAGATTATGTTAAAGTATGATTTTGTGAGTCTTGAAATGGCTTATGTGTTTTATAGTTGGTATGGGAGGTTTAACGGGTTTGCTGTTCGAAAAAGCAAGATAAGTTATAATTGTCGGAAGGAAATTGTTGGTCGTGACTTTTTGTGTAACAAAGAAGGCAAACGGAGAAAACAAAATGATGATAGTGATTCAGAAGAAGATCCCGAACGAGAGCCTAAACCACAGACTAGGTGTGAGTGTAAAGCTAAATTTCGTGTGCATGTTGATTTTAATTCACGTCGGTGGTATGTGACGTGTTTTGACAATAGACATAATCATGAGCTGCTAGATGAAAAGTTTTTTGGTATACTACCAGCTCATAGAAATATGAGCGAAGGGGATATTATAGAGATGAATAATATGTTAAAGGCTGGTATAGGGGCTCCACAAATTTATAATTCATTTGCAAGCCAAGCAGGAGGGTATGAAAAGGTTGGTTTCTAG 624 0.359 MSNLSEHKEDENDGNENEGSENELSEHICIDNFQDIVKNNLVSKSPEQIMLKYDFVSLEMAYVFYSWYGRFNGFAVRKSKISYNCRKEIVGRDFLCNKEGKRRKQNDDSDSEEDPEREPKPQTRCECKAKFRVHVDFNSRRWYVTCFDNRHNHELLDEKFFGILPAHRNMSEGDIIEMNNMLKAGIGAPQIYNSFASQAGGYEKVGF. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00375 207 MobiDBLite consensus disorder prediction 1 23 - -
Seca2g00375 207 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 203 - -
Seca2g00375 207 Pfam FAR1 DNA-binding domain 64 156 IPR004330 -
Seca2g00375 207 MobiDBLite consensus disorder prediction 100 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00375 Seca-Chr2 5250588 5251211 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g00375 FAR1 4.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00375 - - tpra:123913749 193.356