Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00366 ATGACGATCGGAAGTCTTTCACCTAAGACAGAGAAGAAGAAATCACGAAAGAACAAGGCAGTTGTTGATGAGAATGCACCCTTGTTGCCTAAAAGTCAGGAGAGTGATGCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTATCCACTACAATTATTGGTGCTGGGATCATGGCCTTGCCTGCAACCTTGAAACAGTTGGGGATGGTGCCTGGCCTTCTTGCAATCCTCATCATGGCTCTATTGACAGAGAAGTCAATTGAGCTTTTGCTTAGGTTTACCAGGGCAGGAAAGGCTGTTTCTTATGCTAGTCTGATGGGGGATTCCTTTGGGAAATATGGAAAAGCTCTGGTGCAGATATGTGTTATAATCAATAACATTGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAGGTGGAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACAGGGCGGACATTTATTGTCCTTCTTACAACAGTTGTTATATTTGCACCTCTGGCGAGCTTTAAGCGAATTGATTCATTGAGATTCACATCGGCCCTTTCAGTTGCACTAGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATTGTCAAGATTATAAGTGGAGGCATTAGCATGCCCAGACTCTTCCCAGTCGTTACTGATCTACCATCAATCTTTGAATTATTCACTGTTGTTCCTGTGTTTGTGACTGCCTATATCTGCCACTACAATGGTATGCAGTTTATTCAAACCTCTGTGTCAATTCACAGCATAGATAATGAACTTGAGGACTCCTCACAGATGCAAGGGGTTGTACGCACCGCCCTTGGTCTATGCTCTTCAGTGTACTTAATGATCAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGATACCGATCTTGGAATCCCTTTCGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTATGCTGCTCACCTCATGCTTGTATTTCCAGTTGTTTTCTATCCATTGCGGCTCAATATAGACGGTCTCTTCTTCCCAAAATCAAGGCCCTTGGTTCTTGATAACTTCCGATTTGCATCAGTCACTGTTGCCCTTATTGGTGTTATCTTCCTGGGAGCAAATTTCATACCTAGTATTTGGGATGCTTTCCAGTTCACAGGAGCAACCGCCGCAGTCTGTATTGGATTCATATTTCCAGCTGCCATCACTCTTAGGGACCGCTACAACATAGCAACTAAATCAGACAAGATTCTGTCTGTCATTATGATAGTCTTGGCAGTATTCTCAAACGTTGTGGCTATTTACAGTGATGCCTATGCCTTGATCAAGCAGAATAAGTCCAAACGTGAATGA 1422 0.429 MTIGSLSPKTEKKKSRKNKAVVDENAPLLPKSQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMVPGLLAILIMALLTEKSIELLLRFTRAGKAVSYASLMGDSFGKYGKALVQICVIINNIGVLIVYMIIIGDVLSGTSSGGDHHYGILEGWFGVHWWTGRTFIVLLTTVVIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGISIVKIISGGISMPRLFPVVTDLPSIFELFTVVPVFVTAYICHYNGMQFIQTSVSIHSIDNELEDSSQMQGVVRTALGLCSSVYLMISFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLFFPKSRPLVLDNFRFASVTVALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILSVIMIVLAVFSNVVAIYSDAYALIKQNKSKRE. 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00366 473 MobiDBLite consensus disorder prediction 1 25 - -
Seca2g00366 473 Pfam Transmembrane amino acid transporter protein 45 459 IPR013057 -
Seca2g00366 473 PANTHER AMINO ACID TRANSPORTER 43 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00366 Seca-Chr2 5126652 5130901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00366 3 472 Amino Acid or Auxin Permease AAAP Family AT3G30390 66.170 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00366 K14207 - gmx:100796345 793.882