Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00362 ATGCAGGCTAGTGAGATAACAGGACTCAATTATTTACTCCCTTCAGACCCATCTCCTTACCCTGGTCTCTACAGCATGATTCAGAACAACATCCCTACATTTCAACTTCAAAAATTCTCTAACCAATTCTATGGTTTCCACAACCCTCCTCCTCATCAAGATTTCAGTCCTCAGTCCTCATGTATCAGCAGCAACTCAACTTCTGATGAAGCTGATGAGCAACAACAAAGTCTCATCAATGAGAGGAAACACAGAAGGATGATATCAAACCGAGAATCAGCTCGCAGGTCACGGATGAGGAAACAGAAACACCTTGATGAGCTTTGGTCAATGGTGGTTTGGCTTAGGAATGAGAATCACCAGCTACTAGATAAGCTGAACCATGTGTCAGAGTCTCATGATAAAGTCCTTCAAGAGAATGTTCAGCTGAAAGAGGAAGCTTCAGAACTTCGTCAAATGCTATGTGACATGCAGATACATAGTCCTTGCCCTTCTTTAAGCCCCCTTGAAGATATCCCCAACAACTCACCCCATGGCAAATCTGATTCCTCAAACCAATCAATCACAAGTTCTATGGACCTACTTGGCTAA 591 0.4298 MQASEITGLNYLLPSDPSPYPGLYSMIQNNIPTFQLQKFSNQFYGFHNPPPHQDFSPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSMVVWLRNENHQLLDKLNHVSESHDKVLQENVQLKEEASELRQMLCDMQIHSPCPSLSPLEDIPNNSPHGKSDSSNQSITSSMDLLG. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00362 196 Coils Coil 133 153 - -
Seca2g00362 196 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Seca2g00362 196 MobiDBLite consensus disorder prediction 168 196 - -
Seca2g00362 196 MobiDBLite consensus disorder prediction 75 99 - -
Seca2g00362 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Seca2g00362 196 MobiDBLite consensus disorder prediction 165 196 - -
Seca2g00362 196 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Seca2g00362 196 Pfam bZIP transcription factor 82 140 IPR004827 GO:0003700|GO:0006355
Seca2g00362 196 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
Seca2g00362 196 FunFam BZIP transcription factor 80 131 - -
Seca2g00362 196 MobiDBLite consensus disorder prediction 45 74 - -
Seca2g00362 196 Gene3D - 80 135 - -
Seca2g00362 196 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 10 168 IPR044521 -
Seca2g00362 196 MobiDBLite consensus disorder prediction 45 99 - -
Seca2g00362 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00362 Seca-Chr2 5057666 5058256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00362 18 162 bZIP Transcription Factor Family AT3G30530 64.189 6.47e-53 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca2g00362 bZIP_1 1.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00362 - - aprc:113863596 333.954