Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00332 ATGCCAATGGCAAAGAGGTCCCAAAGATTCCCTGTGCAGTATGAGAAAGATCAGTCAGGTTGTATGTGGGGTTTTATTAGTATATTTGATTTTCGCCACGGCCGCTTCACTCGGAAGTTGATCGCAGATAGGAGGCACAGCAGCAAGCATGCTGTTGGTTCTATACTTACCAAGAACAAATTTGAGACGTTGAGCAATTTGGATGAAGAATATCAAGGAAATTTTGACAGAGGAGAGAGTAAGAGGTTAACAGTGACAACTGATGCTGATAAGCTTAGTGTGAAGAAACTTATAGAAGAAAAGTTCATTGATCAGGATGACATGAAGGACCAAGGTAATGTTGAGGTAGAATCAAAGCGATCCGGCTTAGGGCGTGAAGACTCCTTGAAGAAAGATTCCAAAAGAAAAAAGAAATCTCGCAAGAAGAGCCGTGATATGGACACCCATGATTCGAATGTGACCTCTGAATTCTCACATAATCAGCATTCGAAGCAACAATCAAAAGATAATCTTGATTTGGACAAGATAATGGAAGATTTTTGTCATATTGAAGCTGTTTGTTCCATGATGCATGACAATGATGGCAAAGTTAATGCACAATCAAACCAAAAGCATATTATTTCTGAAGACCTTGCAAGAAATGCAGTCCATGAATTTGTGAATCAGATGGTATCAAATGGGAAAGATGTAGCAGAAGATAGAAACTTCCTTTGCTCACATGAACTCGTGGAAGCACTTCAGGTTATAAGCTCAGATAAGGAATTGTTTCTTAGACTTCTACAAGATCCAAATTCACACTTACTGAAATATATTCAGGAGTTGGAGAATGCTCATGGGAGAAGAGACAAAGCATACAGTTCAGTTACTGGCTCCAACTTCTCTGAACAAGACCTTGACAATCTGAAACAAACTAGGGAGACTGTCAGCCACAAGCATCGTAACTTTTTCAGGAAAAAGGTAAAGTCTCAATCAAAAGGTCCAACAAATAACGATGGGAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAATGGGCATGCAAAATTCTGAAAGTGAAAACAACCTTGCCTCATCGTTAGATTCTCAAGATATTGTCCATTACAAAGGTCCTTATGTACGAGTTAGTTCACATTTTTCTCTTACAGAGATAAAAAAGAAACTAAAACATGCTATGGGAAAGGAGAGACATAGAAACCCTGAATGTCAAAATAAGGGGCCAGGAGGCAATGTCATTGGTAAAGATAATGTTGGAATGAGATCTCCTAATAAAGATCACTTCTTCATTGAAAAAATTGCAAGACCTATGTTTGATGTTATGAAAGGAAACAAGACTGGTGCATTGAAAGACTCTGAATTTAATTTGGATCATGAAAGTGGTACTCCCAAAGAAAGGGTTTCTAACATATATATTGAGGCTAAGAAACATCTCTGTGAGATGCTAGAAAATGGAGATGACAACATAAACATTTCAAGCAGCCAGATACCCAAAACCCTTGGGAGAATACTATCTCTTCCTGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGACGAAATTTGGAGCATCATTTTGTGACTGCACAGGCAAGATTTTCTACTTCAGATAAAACTTGTGAGCTTAGTCATCTGGATCAGGAAACAAATAATTCAGAGAACCAGTCAAGCATTTATGATGAAAGCTCTAATAATGAAGTACTAGAAATTAAGTCCGAGTCAACTCTCTCTCATGATCTTGGACATGTTGATACTGTTGAAGGCTGCTACCCTGTTAGAGATGAGATAGTTACTGAAGGTACTGTTTTCAAAGTACTTGATTTAAATTATGGGTGCTATGGTAAACTTTAA 1854 0.3797 MPMAKRSQRFPVQYEKDQSGCMWGFISIFDFRHGRFTRKLIADRRHSSKHAVGSILTKNKFETLSNLDEEYQGNFDRGESKRLTVTTDADKLSVKKLIEEKFIDQDDMKDQGNVEVESKRSGLGREDSLKKDSKRKKKSRKKSRDMDTHDSNVTSEFSHNQHSKQQSKDNLDLDKIMEDFCHIEAVCSMMHDNDGKVNAQSNQKHIISEDLARNAVHEFVNQMVSNGKDVAEDRNFLCSHELVEALQVISSDKELFLRLLQDPNSHLLKYIQELENAHGRRDKAYSSVTGSNFSEQDLDNLKQTRETVSHKHRNFFRKKVKSQSKGPTNNDGKTEFSNRIVILKPALMGMQNSESENNLASSLDSQDIVHYKGPYVRVSSHFSLTEIKKKLKHAMGKERHRNPECQNKGPGGNVIGKDNVGMRSPNKDHFFIEKIARPMFDVMKGNKTGALKDSEFNLDHESGTPKERVSNIYIEAKKHLCEMLENGDDNINISSSQIPKTLGRILSLPEYNFSPLGSPGRNLEHHFVTAQARFSTSDKTCELSHLDQETNNSENQSSIYDESSNNEVLEIKSESTLSHDLGHVDTVEGCYPVRDEIVTEGTVFKVLDLNYGCYGKL. 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00332 617 MobiDBLite consensus disorder prediction 109 133 - -
Seca2g00332 617 MobiDBLite consensus disorder prediction 394 420 - -
Seca2g00332 617 MobiDBLite consensus disorder prediction 109 169 - -
Seca2g00332 617 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 3 594 - -
Seca2g00332 617 Pfam Protein of unknown function (DUF3741) 221 265 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00332 Seca-Chr2 4676058 4679085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00332 3 574 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.046 7.31e-59 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00332 - - gmx:100783243 863.218