Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00331 ATGAAATGTCTTTCCTCAGACAACATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTTCTCAAACCTGCTTTGCCATGATCAGAAGATCCTATTCGATTGTATCAACGAAGTTCTCATGGAGGTTTGTTGGTATTACTTTGGGGTCTCACCTTGGGTATCATTTGTAAATCCTAGCATAAGGCCAACTCCAAATATGAAAAAGGTCATTGTCAAGGTGTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCACCACATACTTTGGAGCAAATTGTTAGGAAAGACATGGCAAGGAGGGGAACATGGATGGACCTTCAATTTGATGTTGAAACAGTTGGTTGTGAAATGGGTGATGCCATTCTTGCAGAACTGATGGAAGATACAATTTTGAGCCTTGTGAGTGAAAGTACAGAAAGCAAATGTTCCCTGCTTCAATTTGAATTGAAGGACAATGAGAGCAGCATTAACTTGTAA 483 0.4161 MKCLSSDNILDPSLFDQVEFFSNLLCHDQKILFDCINEVLMEVCWYYFGVSPWVSFVNPSIRPTPNMKKVIVKVWEGVCWHVLPLPPPHTLEQIVRKDMARRGTWMDLQFDVETVGCEMGDAILAELMEDTILSLVSESTESKCSLLQFELKDNESSINL. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00331 160 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 135 - -
Seca2g00331 160 Pfam Domain of unknown function (DUF4378) 3 130 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00331 Seca-Chr2 4674604 4675086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00331 6 132 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 53.543 2.64e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00331 - - aip:107635037 260.381