Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00317 ATGGATGCTCGCCGAGCTCCACGCGCCGTCATTGACCCCAAGGTTCGCAAAGTCGGATTCTTCGCTCCACCCGAAAACTCTCAAACGGCTCAACCCGACCCGTTTTCGTTCGACATTTCTCCATCCGCCAACTCACTCTCTCCGGTCATGATCCCGCCGCCGCTCCACTCGTCGGAAAATCTCAACCTCCATGCTCGCCCCGCCGCCGCCGCCGCGGTTTCCCCTTCCGGCGAGGAATCCTCCGCCGCCGCACGGAGCTATAGCAGCAGCTCATCGGAGCTCTTTCCCGCTCCGATGTCCCCCGCACCGTCTTCCTACTCGAGCAGGAACTTTGTCGGCGGCGATGGAGATTTCTTCTTCGATGGCGCTGCTGCATCTCCGCGTCGCCGCGGCAGCGGTGGAGGAAAGGTGGCGTCGTCATTTCCTCGCGGCGGATTCGACTTGACGGCGATGAAAGCGAGTAGCGTTCCTGCAAGTGAATTGACGACAGTTTCGGTGGTGAATGCTGCTGCTTCCCTTGCAATTCACGGCAAAGGAGGAGGGTCAACAATGGAAGTGAAAGACCAAGCTATGAATGCACAACCGAAGAAAAATAAGACCACAAAAGCTGAAAGACGTGCCCTTCAAGAAGCTCAGCGAGCTGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAAGCATCTGGAACCGTGACTTCAGTGAATGCAAAATCAGCTAAAACTGCAAAGCCCCTGCAGAAAGTTGATAATGCTTCAGTTGCTGCCTCTGAGAAGAAGGGAGGTGACCGTCCATCAGAAAAGGATAGAAAGAAAGATGTTCCTCAACCACGCATGCAATATGATGATAAGAGCAGAGTGGAGAAGGCTAAACGGCGTGCTGTGGTAAAACAAACTGAAGCCAGGAACAGAGTTGAACTGTTCAGGCATTTGCCACAGTATGAACATGGGAGTCAGCTTCCTGATCTTGAGGCGAAGTTTTTCCAGCTGGATCCTGTGCATCCTTCAATTTATAAGGTGGGTTTGCAGTATCTGTCTGGAGATATATCTGGTGGTAATGCACGTTGTATTGCTATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACAGAGTTCCCCCTGAGAAGACTCTTGTGAGAGACATGACAGCAAAAATAAGTAGCTATGTTTCGTTCCTTATTGAGTGTCGACCTCTTTCTATCAGCATGGGAAATGCAATTAGATTTGTCAAAAGTCGAATTGCCAAGCTACCTCTGACACTGTCTGAGTCAGAATCAAAAACTTCTCTTCAGTCAGATATTGAGCGTTTCATAAATGAGAAGATTATACTTGCTGACAAGGTGATAGTTAAGCATGCTGTCACAAAAATAAGAGATGGGGATGTTCTTCTTACTTATGGGTCGTCATCAGCAGTTGAAATGGTACTATTACATGCACATGAGTTAGGAAAACAGTTTCGAGTTGTAGTAGTAGACTCTCGTCCTAAGCTTAGAGGGAAACTTTTGCTTCGTAGGCTGGTGGAGAAAGGTCTCAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGAGTTTTTCTGGGTGCTTCATCAGTTTTGGCTAATGGAACAGTGTATTCAGGAGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGTGTTCCGTGTCCCTGTTATAGTATGTTGTGAGGCTTATAAGTTTCATGAAAGGGTACAGCTTGATTCAATATGCTCAAATGAACTCGGTGATCCGGATGTCATTTCAAAGGTTCACGGTAGAGAGGATGTTAACCTCTTGGAAGCTTGGGCCAAAACTGAAAATCTGCAACTTCTAAATCTGATGTATGATGCAACACCTTCAGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTCCCCCCTACAAGTGTTCCTGTAATTGTAAAGGAATATAGCAGAGAACAGGTATGGATGTGA 1971 0.4723 MDARRAPRAVIDPKVRKVGFFAPPENSQTAQPDPFSFDISPSANSLSPVMIPPPLHSSENLNLHARPAAAAAVSPSGEESSAAARSYSSSSSELFPAPMSPAPSSYSSRNFVGGDGDFFFDGAAASPRRRGSGGGKVASSFPRGGFDLTAMKASSVPASELTTVSVVNAAASLAIHGKGGGSTMEVKDQAMNAQPKKNKTTKAERRALQEAQRAAKAAAKAEGNKASGTVTSVNAKSAKTAKPLQKVDNASVAASEKKGGDRPSEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFQLDPVHPSIYKVGLQYLSGDISGGNARCIAMLQAFQEAIKDYRVPPEKTLVRDMTAKISSYVSFLIECRPLSISMGNAIRFVKSRIAKLPLTLSESESKTSLQSDIERFINEKIILADKVIVKHAVTKIRDGDVLLTYGSSSAVEMVLLHAHELGKQFRVVVVDSRPKLRGKLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLANGTVYSGVGTACVAMVAHVFRVPVIVCCEAYKFHERVQLDSICSNELGDPDVISKVHGREDVNLLEAWAKTENLQLLNLMYDATPSDYVSMIVTDYGMVPPTSVPVIVKEYSREQVWM. 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00317 656 MobiDBLite consensus disorder prediction 191 293 - -
Seca2g00317 656 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 40 653 - -
Seca2g00317 656 MobiDBLite consensus disorder prediction 20 108 - -
Seca2g00317 656 MobiDBLite consensus disorder prediction 24 46 - -
Seca2g00317 656 MobiDBLite consensus disorder prediction 258 293 - -
Seca2g00317 656 Gene3D - 443 649 IPR042529 -
Seca2g00317 656 MobiDBLite consensus disorder prediction 79 108 - -
Seca2g00317 656 Pfam Initiation factor 2 subunit family 347 639 IPR000649 GO:0044237
Seca2g00317 656 SUPERFAMILY NagB/RpiA/CoA transferase-like 304 649 IPR037171 -
Seca2g00317 656 MobiDBLite consensus disorder prediction 225 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00317 Seca-Chr2 4499505 4506011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00317 1 656 Eukaryotic Initiation Factors Gene Family AT5G38640 66.324 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00317 K03680 - gmx:100785938 956.051