Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00296 ATGACCATGGTTCCTTCTGAAAGCGGCAAACAAAAGAGGAGTACTAGTGATTATGTTTTTTACAGTGCTATGAACCAAGTCGGTTACAATTGTTTAGGATCTGAATTTTTGGTAACGAGGCACAATATGGCTCAGCCTCAACAACAAATAGATTCATCCACACCCACCAACATCACTAATACTAATTCCAATAACCAACGAGAACAATCCGAAGCTGAACCTGAACCCGAACCCGAACTTGAACCTGAAGCTGGTTCCACATCAAAGGAAGAAGAAATAGAAGAAGGAGCAAACAACAACAACAGCAACAACAATAACAACAACTGGCTTCAATTAAGCATAGGTTTTAATAATCAGAGTCACACAACAACAAGGAGCAACAACAACAACAATCACAACCGAACCGGTTCAGCAAGCGGTTCAGGGCTGGTGGAGCTTGAGTTGTTACCGCAGCGTCATTCTAATTGGGCTTCCTCTTCTTCTTCAAGGCCCATGAGTTTAGAGGCACCGGCGGTTATTTTTCCAGCGAGAGGGTCTTCTTTGGTTTTTGAACAAACGACGTCGTCTTGTTGTTCTTCTTCGATGGCGCCAAGTGGTCCAACATTTGGTCATCAAGAGATGATGAACTGGGCATTTGGTCCACTTTTACCTCATTCCATGCCTTTTACGACGTCGTCTTTGTCATCTTCTTCAATAATCTCACAATCTTTGAGGCCTCCTTTAGCAATATCTAATTATAATTATCCACCTATTCTCCCTCCCTTTCATCACCATCACTTTCCTTCTTCTTCTTCATCTTCTGGGTTTGATCAATTTGACGTGGCTGGAATGAGCTCTGATGTCACCGTTCGAGTTGTTGATCCTCCTCGGAGACCTCATTCTGGAATATGGTTTATGCTACAAGCCTCACAAAACCAAGGGAAAGAACCGTTTTTGCCTCAAATACCTAAGAACTACCTTAGAATCAAAGATGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAAACTGGAGAGCGAATCAGAGATAGAGATAACATGCAGAGGGCAGCAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGACACCAAGGGACATTACCACAAGAACTTTGCTTTCAGATTCCTCAACCACAGATCATGTTATGGTGCTCCATTACGGTAGAAGCACTTCTTAA 1206 0.4262 MTMVPSESGKQKRSTSDYVFYSAMNQVGYNCLGSEFLVTRHNMAQPQQQIDSSTPTNITNTNSNNQREQSEAEPEPEPELEPEAGSTSKEEEIEEGANNNNSNNNNNNWLQLSIGFNNQSHTTTRSNNNNNHNRTGSASGSGLVELELLPQRHSNWASSSSSRPMSLEAPAVIFPARGSSLVFEQTTSSCCSSSMAPSGPTFGHQEMMNWAFGPLLPHSMPFTTSSLSSSSIISQSLRPPLAISNYNYPPILPPFHHHHFPSSSSSSGFDQFDVAGMSSDVTVRVVDPPRRPHSGIWFMLQASQNQGKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLKLESESEIEITCRGQQLLPFLTLQHVRDNIWTPRDITTRTLLSDSSTTDHVMVLHYGRSTS. 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00296 401 MobiDBLite consensus disorder prediction 44 140 - -
Seca2g00296 401 Gene3D - 289 396 - -
Seca2g00296 401 PANTHER RING FINGER PROTEIN 4 399 IPR044171 GO:0007275
Seca2g00296 401 MobiDBLite consensus disorder prediction 82 96 - -
Seca2g00296 401 MobiDBLite consensus disorder prediction 44 69 - -
Seca2g00296 401 MobiDBLite consensus disorder prediction 97 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00296 Seca-Chr2 4168493 4178614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00296 309 396 C3H Transcription Factor Family AT3G23060 38.043 2.19e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00296 - - lja:Lj1g3v3138970.1 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00296 2 4168493 4178614 Seca2g00296 2 4168493 4178614 ECH