Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00274 ATGGATTTTTCTTCTTTGACCTCTCACTTCAGAAACTCCGCGAACTCGTTCCTCTCTCAATACGAACCCCTCGCTCTGCTTCTCGCTCCTCTCCTTTCCCTCCTTCTCGCCCACGCTCTTCGCTCCTTCTTCCACCACCTCCATGATAACGGACTCAAAGCCACTCTCATAGGGTTCTTCATGAACTCTATCAAATTGATCCCTGGTGTGAAGAGTTACATAGATGCTGAAAAACGGAAGGTTGTGGATAAGTTGCAGTCTGATAGTAAATCTAAGAGAGAAGGTTGGAAAACAGAGTTGCCAAGCACAGGATTAGGGACATCTGTCCTTGTGAAGATGAGAGAGGAGAAAAGAAATGATGCAATTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATCTGATGGGCATTTTTCTCTGATAAACGAGGCATGTTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTCCAGAGTGTTGTACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCGGCACTTCTTGGAAGTAAGGAAAAGACTTCTGGAGGACAAATATGTGGCAACATGACATCTGGAGGGACTGAAAGTATATTATTAGCTGTTAAATCATCTCGTGACTACATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATAATTCCTGTGTCTGCACACTCAGCATATGACAAGGCTGCACAGTATTTTAATATCAAACTTTGGCGTGTTCCAGTTAACAAAAATTTTCAAGCAGATGTGAAAGCAATTAGGCGTCATATTAACAAAAATACCATTTTGATTGTTGGATCTGCTCCTGGTTTTCCTCATGGAATAATTGACCCCATTGAGGAACTTGGTCACCTAGCATCAAGCTTTGGTATTTGTTTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGGTACCACATTCCACCTTTTGATTTTTCTGTTAAAGGGGTTTCTTCAATATCTGTGGATGTGCATAAATATGGTTTAGCTCCCAAAGGAACAAGCATAGTTCTATACAGGAACCATGAAATCAGAAAGGTAAGCCATTGGTTTGCTTAA 1110 0.418 MDFSSLTSHFRNSANSFLSQYEPLALLLAPLLSLLLAHALRSFFHHLHDNGLKATLIGFFMNSIKLIPGVKSYIDAEKRKVVDKLQSDSKSKREGWKTELPSTGLGTSVLVKMREEKRNDAIWQGKCSGTVYIGGSESDGHFSLINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTAALLGSKEKTSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVNKNFQADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGHLASSFGICFHVDLCLGGFVLPFARELGYHIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRNHEIRKVSHWFA. 370
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00274 369 SUPERFAMILY PLP-dependent transferases 73 363 IPR015424 -
Seca2g00274 369 FunFam sphingosine-1-phosphate lyase 1 138 369 - -
Seca2g00274 369 PANTHER - 36 365 - -
Seca2g00274 369 Pfam Pyridoxal-dependent decarboxylase conserved domain 150 360 IPR002129 GO:0016830|GO:0019752|GO:0030170
Seca2g00274 369 Gene3D - 135 367 IPR015421 GO:0003824
Seca2g00274 369 Gene3D Aspartate Aminotransferase, domain 1 107 134 IPR015422 GO:0003824
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca2g00274 Seca-Chr2 3865002 3869145 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00274 154 360 Calmodulin-binding Proteins AT5G17330 24.658 3.63e-13 68.6
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00274 2 3865002 3869145 Seca2g00274 2 3865002 3869145 ECH