Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00273 ATGGATAGAAAAGTGGATATCCTAAGGCTATACATACAAAATGGACTTGGTTCAAGAGTCCTTTTCATTTATTTTGGAAATCTTGGAGAGCTGATTACTAATGTATTTTCTTTCTGGCTTGTGGACTCTGCAGCATCAATTTGTTGCTGTGTCACAGTTACTGAATGGTCCGGTGGGTTTTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGAAGCCTAATTGCTGGTGCATGGGCAGCAATGATGTCCCTAGGCAAAGAAGGTTACTTGGAAAATACAAAAGCAATTATGGAAGGATCAAAAAGACTGCAGAAAGGCATAGAGGAGATTGCTGAGTTGTTTATCGTTGGAAGACCCGATATGACTATCGTTGCTTTTGGATCTGCTGTTCTGGATATATTTGAAGTCAATGATATTATGTCATCCAAAGGGTGGCATTTGAATGCATTGCAGAGACCCAACAGCATCCATATCTGTGTGACACTACAACATGTACCAGTTGTTGAAGACTTTCTAAGGGATTTAAAGGAATCTGTGAAAACTGTGAAAGAAAATCCCGGTCCAATAAGTGGAGGCCTGGCACCTATATATGGCGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGAATTGCTGGTAGATTTTATGGACGGTACCTGCTAG 669 0.4245 MDRKVDILRLYIQNGLGSRVLFIYFGNLGELITNVFSFWLVDSAASICCCVTVTEWSGGFYVSPTIAGSRPGSLIAGAWAAMMSLGKEGYLENTKAIMEGSKRLQKGIEEIAELFIVGRPDMTIVAFGSAVLDIFEVNDIMSSKGWHLNALQRPNSIHICVTLQHVPVVEDFLRDLKESVKTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVDFMDGTC. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00273 222 SUPERFAMILY PLP-dependent transferases 48 185 IPR015424 -
Seca2g00273 222 PANTHER - 51 222 - -
Seca2g00273 222 Gene3D Aspartate Aminotransferase, domain 1 67 183 IPR015422 GO:0003824
Seca2g00273 222 FunFam Sphingosine-1-phosphate lyase 1 182 221 - -
Seca2g00273 222 FunFam Sphingosine-1-phosphate lyase 1 75 185 - -
Seca2g00273 222 Gene3D - 184 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00273 Seca-Chr2 3861849 3864632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00273 65 220 Calmodulin-binding Proteins AT1G65960 27.811 1.27e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00273 K01634 - gmx:100794743 332.413