Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00262 ATGCTCAACCCGAAGGCCCATCATCAGAAAGCTTCTCCCAAATCGTTTCAGATATTCTTAACCTTCTCCACTTGCCTAGAAGCCCACCTTCCCCATTTGGGAACTCCTCTCTATCTTTTGAAAACCCAAACCACAACACCACCACCAATCTTTCCAAGACCCTCAAGCCATGCCACCTGGATTGGTAATTGCCCTATTGGGGCAGAAAGCACAAATGTTTCCTCTGTTACTTATGACCCTTTGCTGCATTTGAACTTGCAAGCACCACCACAAGGTGCTGCACTTCATCCTCTACCCCATGGCTACACCATAGCTTCAGGAAATGATTTTGTCTTTGGTGAAGGGGATGCCATAGAAGGTAGTGGGGTTGCTTACCAAGATGGAGATGGGAGAGATTTTGGTAATGGAGTTTTAGAGTTCACCCAAGATGTGACTTATGTTGGTAAAAAGAGAGGAGGGAAAAGGGTCAAGCAATTCACCAGTACAAGTGAGAAACAAAAGAGAGTGGATTTGAGTAGGAAGTTTGATGCCTTAAAAGAACTCATCCCAAACCCTTAA 558 0.448 MLNPKAHHQKASPKSFQIFLTFSTCLEAHLPHLGTPLYLLKTQTTTPPPIFPRPSSHATWIGNCPIGAESTNVSSVTYDPLLHLNLQAPPQGAALHPLPHGYTIASGNDFVFGEGDAIEGSGVAYQDGDGRDFGNGVLEFTQDVTYVGKKRGGKRVKQFTSTSEKQKRVDLSRKFDALKELIPNP. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00262 185 PANTHER TRANSCRIPTION FACTOR BHLH91 62 185 IPR045895 GO:0006355|GO:0048658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00262 Seca-Chr2 3729450 3732161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00262 64 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 30.159 1.51e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00262 - - vra:106767981 139.043