Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00250 ATGGAGTCCAAACACCAAACACCAAGTGTAATTTTAGAATTGATGGGACTTGATAAAGTGCCTCCCCAACATCCTGTTAGAGATAAACAGAAAGTGCTCTCTGAGAATTATCTGCAGAAAATTGCTTCTATTGGTGTCAGAAAGAAGCGATCATCTCACCAGCATCATTCCAAAGGAATGAGTACTGATGAAAAGGAAGAATCTGATGATGTTTCAAAAGTGGTCAAAACAGTAAGGAGAGATAAGCACCATAACCCGTCAAATGGAAATGGGAAAGAGAACCCATATTTGTCTGGAACAAAGGTAAAAGATGTGCCGCAACAGTTGTTGGATGCTTCAGTCAGGGGGAAGCCTGAAACCTTGGTTGATACCATTAGTCCATTCAATCTTGAAACAGGTGTGAATTCAGGGAGGATAGCTGAGCAGGAAAATCTGCCACTTGAACATAAAATGAATAATGGGTTGCAAAGTGACATGCATGGGGAAGCTGGATTGTATGAAACATTTAGGCTTTCAAAATCTCAATTGCATCTGAAGGATGAAACTTTCGAATCAAGAATTACTGTTTTGAAAGCGAATCCTAAAAAGAGAGAAAATAGTTTAAAATATTTTTCATTTCCTAGTTCTTGCAGAAATCCTCATTTGGCTGATGGGCTGCTCAAAGAGATATTTTGTCCTAAAAGTACGAGAGTATATCCTGAAATGAGAGTTAGAAAGAAAACATCCTATCACATGAAATTTGGTAAGCAGTGTTCAAGATCTTTTAGTAAAACTTCAGAGGAGGTTTCTGTGCAAAGGGGAAGTGTTGCAAACAGAGTTTCAGATACCGTTTCAAGTTCAGTTTTTAGAGGGAATGAAGCATTTATCAAAAGTTCTAATATGCTGGAGCCTGTTTCAAATGTTTCAGTTAATGAGATCCAATTGCAAAAAGTTGGAAATGGAGCAAGGAATTTGAGTCATCAAAGTGGTTTTAGCAATGATAAAAATAGAAGGAACATTGGATGTAAGGTTGGTTTGAATTATAGCTTTGCCAGAAAAGTGCAAATGGCCAGACCTCTTTATGTGGCTTCTGTTATTGCTGATAAATGTGAAACTATGACCAGGGACAACTTGTTTCAGAAATATTGGGGTTTGAGGAAGAATGAATCTGCAAATTGGTCAACCCAGAAGTCAAAGAATCAAGATATTAATCAGCAAGATTATTCAGAAGATTTGCACCTCAGGTCCAGCAGTGAGAAATCCCCTTCTTTTTCCACTTATTTTAATAGTAATCATACTAAAGAGGATTGTATTGGCCCTAATAACTTGAAGAAGAGATGTTATGGGAATGATTTCTCTGCTAAGAAACCTATGCTTCCTCATTTGTCAAGCTCTGGTCCTTCTCCTGCCTTCATAGACAGTCATATCTTGCAAGAGTCATGCTTAACGAACAATGAAGTGAAGAACAATAAGCATGAAGTCAGTAATATGACTAAGCAAAGTGTTGTGTCTCCTGATTCATTAGTTGATTGCTTGGTGTCTGATGCAAAGACTCAGGTTGTTGGCTGGTCACCAAAATATCCAACCAAGCAGCAATCTGAATCAACAGCCTTCATTTTGACACATGGGGACAATGATTCTTTGAGTGATACTTTTTCTGCTTCAACACAACAGGATACATCAGAATTTCAAGAAGACTCACTTTGCTCTGGGGCTGACAAAGATTCCCTTGGTAGTTTTGAGGAGGCATATGAACCTAGTCCAATTTCAGTTTTGAATCCCTCATTTAGAGAAGACAATTCATTTAGCTCTGAATGTGGTGCTGGTGTATATGATTCCTCTGAAGTGGATGATGAAGGACTTGATTTGAATGTTTCAAGTGATGAAGATTGTGGGAATGAATCTATAGGAGGTGACTTTGAAGAAAAGAAAGAGATAGCAGGACTATCTAGAACTGAAGAAAGTAGGGATTTCTCCTATGTTGTTGAAGTCTTAACTGAGGCAGGTATATCTAATAGGAGCTTGTTCACAGACTTTTCTACATGGCACTCTGCAGAATGCCCTATTAGCCCTTCTGTCTTTGAAATCCTGGAAAAGAAATTTGGTGAGCAGCAACACTGGAAAAGATCTGAAAGGTGGCTTCTATTCGATCGCATTAATTTAGGTCTGTTAGAGATTCTCCAGCCATATTTGTATGTTCCAATGTGGGAAAAGCCTGTGTCAAGAAGGTTGAATGGTGAACCAAGCCAGGACATGATTGAGGAGGAGATGTGGGGGTTGCTTGTTGCCAATGAAAAGAAAGCTAGTAAGGAATCAGCAGACAATATGCTTGGAGGGGAAATTAGGTGGATAGAACTAGGTGAAGATATTGAAGATATTGTTAGAGAGATAGTTAATTTGTTAATAGAGGAGCTTGCAAACGAGATGGTTTGCTTGGAGAATTTTGGAGAAGTGTAG 2436 0.3859 MESKHQTPSVILELMGLDKVPPQHPVRDKQKVLSENYLQKIASIGVRKKRSSHQHHSKGMSTDEKEESDDVSKVVKTVRRDKHHNPSNGNGKENPYLSGTKVKDVPQQLLDASVRGKPETLVDTISPFNLETGVNSGRIAEQENLPLEHKMNNGLQSDMHGEAGLYETFRLSKSQLHLKDETFESRITVLKANPKKRENSLKYFSFPSSCRNPHLADGLLKEIFCPKSTRVYPEMRVRKKTSYHMKFGKQCSRSFSKTSEEVSVQRGSVANRVSDTVSSSVFRGNEAFIKSSNMLEPVSNVSVNEIQLQKVGNGARNLSHQSGFSNDKNRRNIGCKVGLNYSFARKVQMARPLYVASVIADKCETMTRDNLFQKYWGLRKNESANWSTQKSKNQDINQQDYSEDLHLRSSSEKSPSFSTYFNSNHTKEDCIGPNNLKKRCYGNDFSAKKPMLPHLSSSGPSPAFIDSHILQESCLTNNEVKNNKHEVSNMTKQSVVSPDSLVDCLVSDAKTQVVGWSPKYPTKQQSESTAFILTHGDNDSLSDTFSASTQQDTSEFQEDSLCSGADKDSLGSFEEAYEPSPISVLNPSFREDNSFSSECGAGVYDSSEVDDEGLDLNVSSDEDCGNESIGGDFEEKKEIAGLSRTEESRDFSYVVEVLTEAGISNRSLFTDFSTWHSAECPISPSVFEILEKKFGEQQHWKRSERWLLFDRINLGLLEILQPYLYVPMWEKPVSRRLNGEPSQDMIEEEMWGLLVANEKKASKESADNMLGGEIRWIELGEDIEDIVREIVNLLIEELANEMVCLENFGEV. 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00250 811 Pfam Domain of unknown function (DUF4378) 650 801 IPR025486 -
Seca2g00250 811 MobiDBLite consensus disorder prediction 56 88 - -
Seca2g00250 811 MobiDBLite consensus disorder prediction 1 99 - -
Seca2g00250 811 PANTHER AFADIN 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00250 Seca-Chr2 3643511 3649840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00250 562 803 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 33.962 7.13e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00250 - - lang:109354222 909.442