Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00247 ATGGTTATGATGACTGCAGCTGTGACCTACATAGACTCTAGTGCTGTTCAGGCTTTGAAGGATCTGTATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCAAACCCAGAAGTTTTGCTTACCTTGTCTAGATCCGGTCTCGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCCTGCAGCATGTTCAAAGCTTGAAAGCAAAATCTTATAGTTCACAAACGCCATCCTCTTTATCAGAGGACAAATCAAGGTTCTTTGCTCACTTATTTAAACAGAGAGGAGAGAACCTTTCAGTTACGGACGTGGAGTCTGGTCATGGCAGGCCTCCACCCTCCGAGGACAGAGATTCCCAATTGGAGCCATTGTTGTCAAAAGAACGTTGA 423 0.4374 MVMMTAAVTYIDSSAVQALKDLYQEYKLRDIQIAISNPNPEVLLTLSRSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKAKSYSSQTPSSLSEDKSRFFAHLFKQRGENLSVTDVESGHGRPPPSEDRDSQLEPLLSKER. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00247 140 PANTHER SULFATE TRANSPORTER 4 81 IPR001902 GO:0016020|GO:0055085
Seca2g00247 140 MobiDBLite consensus disorder prediction 120 140 - -
Seca2g00247 140 ProSiteProfiles STAS domain profile. 1 71 IPR002645 -
Seca2g00247 140 Gene3D STAS domain 1 79 IPR036513 -
Seca2g00247 140 Pfam STAS domain 5 67 IPR002645 -
Seca2g00247 140 CDD STAS_SulP_like_sulfate_transporter 7 64 - -
Seca2g00247 140 SUPERFAMILY SpoIIaa-like 6 71 IPR036513 -
Seca2g00247 140 MobiDBLite consensus disorder prediction 110 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00247 Seca-Chr2 3618665 3619434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00247 1 77 Inorganic Solute Cotransporters AT5G13550 72.727 2.14e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00247 K18059 - lang:109356003 215.312