Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00246 ATGAGATGCATCTTTTCTGGAATACTGATTATGAATTTTATGGCTGCAATAATCCAGTGTGCTCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTGGATTATGAAGAGGCCATTTTTTTGTGGCGAGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGCACTACAACATTGTTCCTTGGTATTGAAATTGGCGTACTTGTTGGGGTTGGGGTGTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACACGTTGCTGTTTTGGGTCGCTTGCCAGGGACAACTGTTTATAGAAATGTTAAACAATATCCTGAAGCATATACATACAATGGCATTGTAATTGTTCGTATTGATGCTCCTATTTATTTTGCAAACACAAGTTTCATAAAGGACAGGTTGCGGGAATATGAAGTAGATGTTGATAGTTCTACAAGACGTGGGCCTGAGGTTGAGAGAATTCATTTTGTGATCCTAGAGATGGCCCGTAAGTTCTGCTTACCTTGTGTACGAAGAAGCATATGTTTTATTAATGATCTCAAGCCATCTTTAGAAGCAATCGTTGTGCCCAATGTAGCTTCTATCTTTAGTCCTTATCAACATTCCACCGACTATCATCCATTGGTTTCCATAAATAGCTTTAATTTGGTACTGGCACTGGTAAGGAATCCTGCTCATCAGATGCTCGATCTCTGTGGGTGCTGTGATGTTTCTAGTAGTTCACAGACTTGA 741 0.3995 MRCIFSGILIMNFMAAIIQCALAAIVISAVIGLVDYEEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGVSLAFVIHESANPHVAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRIDAPIYFANTSFIKDRLREYEVDVDSSTRRGPEVERIHFVILEMARKFCLPCVRRSICFINDLKPSLEAIVVPNVASIFSPYQHSTDYHPLVSINSFNLVLALVRNPAHQMLDLCGCCDVSSSSQT. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00246 246 Gene3D STAS domain 86 167 IPR036513 -
Seca2g00246 246 ProSiteProfiles STAS domain profile. 106 165 IPR002645 -
Seca2g00246 246 PANTHER SULFATE TRANSPORTER 10 165 IPR001902 GO:0016020|GO:0055085
Seca2g00246 246 Pfam STAS domain 107 165 IPR002645 -
Seca2g00246 246 Pfam Sulfate permease family 9 56 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00246 Seca-Chr2 3615538 3618361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00246 17 165 Inorganic Solute Cotransporters AT5G13550 85.906 9.55e-85 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00246 K18059 - gmx:100775789 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00246 2 3615538 3618361 Seca2g00246 2 3615538 3618361 ECH