Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00228 ATGATGGCAAAAAAATATGAGGGACCTGCAATAGGAATTGACCTTGGCACTACCTACTCATGTGTTGCAGTATGGCAGGAACAAAACAATAGGGCAGAGATCATCCACAATGAACAAGGAAACAGAACCACTCCTTCTTTTGTTGCTTTCACCAATGAACAAAGGTTGATTGGTGATGCTGCCAAAAATCAGGCTGCTGGCAATCCAGCAAACACTGTCTTTGGTAATTCTGCATGGCTTCCTTTTACATCTGATATTATTTCTCTGCTATGCTTTTTATCAGAAAAAAACAAATGA 297 0.3973 MMAKKYEGPAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFTNEQRLIGDAAKNQAAGNPANTVFGNSAWLPFTSDIISLLCFLSEKNK. 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00228 98 Pfam Hsp70 protein 10 75 IPR013126 GO:0005524|GO:0140662
Seca2g00228 98 PRINTS 70kDa heat shock protein signature 61 69 - -
Seca2g00228 98 PRINTS 70kDa heat shock protein signature 39 51 - -
Seca2g00228 98 PRINTS 70kDa heat shock protein signature 9 22 - -
Seca2g00228 98 SUPERFAMILY Actin-like ATPase domain 9 83 IPR043129 -
Seca2g00228 98 Gene3D - 1 80 - -
Seca2g00228 98 PANTHER HEAT SHOCK PROTEIN 70KDA 10 75 IPR013126 GO:0005524|GO:0140662
Seca2g00228 98 FunFam heat shock 70 kDa protein-like 4 95 - -
Seca2g00228 98 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00228 Seca-Chr2 3350641 3350937 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00228 2 74 Calmodulin-binding Proteins AT1G56410 76.712 5.61e-33 118