Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00222 ATGGCAGAAAAGGCAATAGGAATCGATCTAGGGACAACTTACTCTTGCGTTGCAGTGTGGAAACACGATCGCGTAGAGATCATTGTGAACGAGCAAGGGAACAGAACAACACCCTCTTATGTTGCATTCACTGACACCCAAAGGATGATTGGTGACGCCGCTGTGAACCAAGCTGATCGCAACCCAACCAACACTGTCTTTGGTAAAACTCCTAAACTCTGA 222 0.4685 MAEKAIGIDLGTTYSCVAVWKHDRVEIIVNEQGNRTTPSYVAFTDTQRMIGDAAVNQADRNPTNTVFGKTPKL. 74
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00222 73 PANTHER HEAT SHOCK PROTEIN 70KDA 5 68 IPR013126 GO:0005524|GO:0140662
Seca2g00222 73 SUPERFAMILY Actin-like ATPase domain 4 68 IPR043129 -
Seca2g00222 73 Pfam Hsp70 protein 5 67 IPR013126 GO:0005524|GO:0140662
Seca2g00222 73 Gene3D - 1 73 - -
Seca2g00222 73 FunFam heat shock 70 kDa protein-like 1 72 - -
Seca2g00222 73 PRINTS 70kDa heat shock protein signature 54 62 - -
Seca2g00222 73 PRINTS 70kDa heat shock protein signature 4 17 - -
Seca2g00222 73 PRINTS 70kDa heat shock protein signature 32 44 - -
Seca2g00222 73 ProSitePatterns Heat shock hsp70 proteins family signature 1. 8 15 IPR018181 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca2g00222 Seca-Chr2 3263336 3263557 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00222 5 67 Calmodulin-binding Proteins AT3G12580 82.540 6.54e-33 116