Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca2g00222 | ATGGCAGAAAAGGCAATAGGAATCGATCTAGGGACAACTTACTCTTGCGTTGCAGTGTGGAAACACGATCGCGTAGAGATCATTGTGAACGAGCAAGGGAACAGAACAACACCCTCTTATGTTGCATTCACTGACACCCAAAGGATGATTGGTGACGCCGCTGTGAACCAAGCTGATCGCAACCCAACCAACACTGTCTTTGGTAAAACTCCTAAACTCTGA | 222 | 0.4685 | MAEKAIGIDLGTTYSCVAVWKHDRVEIIVNEQGNRTTPSYVAFTDTQRMIGDAAVNQADRNPTNTVFGKTPKL. | 74 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca2g00222 | 73 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 5 | 68 | IPR013126 | GO:0005524|GO:0140662 | |
Seca2g00222 | 73 | SUPERFAMILY | Actin-like ATPase domain | 4 | 68 | IPR043129 | - | |
Seca2g00222 | 73 | Pfam | Hsp70 protein | 5 | 67 | IPR013126 | GO:0005524|GO:0140662 | |
Seca2g00222 | 73 | Gene3D | - | 1 | 73 | - | - | |
Seca2g00222 | 73 | FunFam | heat shock 70 kDa protein-like | 1 | 72 | - | - | |
Seca2g00222 | 73 | PRINTS | 70kDa heat shock protein signature | 54 | 62 | - | - | |
Seca2g00222 | 73 | PRINTS | 70kDa heat shock protein signature | 4 | 17 | - | - | |
Seca2g00222 | 73 | PRINTS | 70kDa heat shock protein signature | 32 | 44 | - | - | |
Seca2g00222 | 73 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 8 | 15 | IPR018181 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca2g00222 | Seca-Chr2 | 3263336 | 3263557 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca2g00222 | 5 | 67 | Calmodulin-binding Proteins | AT3G12580 | 82.540 | 6.54e-33 | 116 |