Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00199 ATGGCCGGAAAAGGTGAGGGACCGGCGATCGGAATCGATCTTGGAACCACCTACTCCTGCGTTGGAGTGTGGCAGCACGATCGCGTCGAGATCATCGCCAATGATCAGGGGAACCGTACGACGCCGTCTTATGTTGCCTTCACCGACACCGAAAGATTGATAGGCGATGCAGCAAAGAACCAGGTCGCCATGAACCCAATCAACACCGTCTTTGGTAATTACACGCTCTATTTGATTTATTCATTGATTTCATTGTTATTGATCTGTTCTAATCAGTAG 279 0.4875 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFGNYTLYLIYSLISLLLICSNQ. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00199 92 FunFam Heat shock 70 kDa protein 1A 2 84 - -
Seca2g00199 92 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca2g00199 92 SUPERFAMILY Actin-like ATPase domain 8 73 IPR043129 -
Seca2g00199 92 PANTHER HEAT SHOCK PROTEIN 70KDA 9 73 IPR013126 GO:0005524|GO:0140662
Seca2g00199 92 Pfam Hsp70 protein 9 72 IPR013126 GO:0005524|GO:0140662
Seca2g00199 92 PRINTS 70kDa heat shock protein signature 58 66 - -
Seca2g00199 92 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca2g00199 92 PRINTS 70kDa heat shock protein signature 36 48 - -
Seca2g00199 92 Gene3D - 2 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00199 Seca-Chr2 2938875 2939153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00199 1 71 Calmodulin-binding Proteins AT5G02500 95.775 9.29e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00199 K03283 - csin:114296234 149.058